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The map label for this gene is qseB [H]

Identifier: 170748483

GI number: 170748483

Start: 2195592

End: 2196257

Strand: Reverse

Name: qseB [H]

Synonym: Mrad2831_2065

Alternate gene names: 170748483

Gene position: 2196257-2195592 (Counterclockwise)

Preceding gene: 170748495

Following gene: 170748482

Centisome position: 36.14

GC content: 72.67

Gene sequence:

>666_bases
GTGAAGATCCTGCTGGTGGAGGACGACGCGGCCCTCGCGGCGGAGGTCGCCAAGGTCCTGCGCGCCGAGAACTTCGTGCT
CGACCACGCCGCCACCGGCGAGGACGCCCAGCATCTCGGCGAGACCGAGGGATACGACGCCGTCGTGCTCGATCTCGGCC
TGCCGAAGGGCGACGGGGTCTCGGTCCTGCGGGCGTGGCGCGCGGCGGGCCGGACCCTGCCGGTGCTTGTGCTCACCGCC
CGGGACGGCTGGAGCGACAAGGTCGCGGCCTTCAAGGCGGGGGCGGACGACTACCTCGTGAAGCCGGTCCGCGTGGAGGA
GCTGGTGATCCGCCTGCGCGCCCTCGTGCGCCGGTCCCAGGGAGGCGGGGCGAGCCGGATCACCTGCGGTCCCCTGAGCT
TCGATCCGGGCCTCGGCGCCTTCGAGCACGAGGGCCTGCCGCTCAAGCTCACCGGCCTGGAATGGCGGGTCCTGTCCTGC
CTGATGCTGAACCGCGAGACCGTGGTGCCGCGCCCGCACCTGATCGAGCGGGTCTACGAGGGCGACGCCGACGTCGACTC
GAACTCCGTCGAGGTGATCATCACGCGCCTGCGCCGGAAGATCGCCCCGGCGCGGATCGAGAGCGTGCGCGGCCACGGCT
ACCGCCTGCACGCGGAGCCCGCCTGA

Upstream 100 bases:

>100_bases
CAGGTGAGGACACGGCCCCAACTCCCGGCGGCGGCAGGGTTCGCGGCCGCCGCAGCGGGCGAAACCGGCCGTCGCGGGCC
CGGACGGGGAGGTGAGACCG

Downstream 100 bases:

>100_bases
TGACGGGGAGGGCGCCGCGGCGCTCGCTCCGCACCCGGCTGCTCGCGGCGGCCCTGGTGCTGGTCCTGGCGGCCCTGGTG
GTGGCGGGCCTCGTCATAGG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKILLVEDDAALAAEVAKVLRAENFVLDHAATGEDAQHLGETEGYDAVVLDLGLPKGDGVSVLRAWRAAGRTLPVLVLTA
RDGWSDKVAAFKAGADDYLVKPVRVEELVIRLRALVRRSQGGGASRITCGPLSFDPGLGAFEHEGLPLKLTGLEWRVLSC
LMLNRETVVPRPHLIERVYEGDADVDSNSVEVIITRLRRKIAPARIESVRGHGYRLHAEPA

Sequences:

>Translated_221_residues
MKILLVEDDAALAAEVAKVLRAENFVLDHAATGEDAQHLGETEGYDAVVLDLGLPKGDGVSVLRAWRAAGRTLPVLVLTA
RDGWSDKVAAFKAGADDYLVKPVRVEELVIRLRALVRRSQGGGASRITCGPLSFDPGLGAFEHEGLPLKLTGLEWRVLSC
LMLNRETVVPRPHLIERVYEGDADVDSNSVEVIITRLRRKIAPARIESVRGHGYRLHAEPA
>Mature_221_residues
MKILLVEDDAALAAEVAKVLRAENFVLDHAATGEDAQHLGETEGYDAVVLDLGLPKGDGVSVLRAWRAAGRTLPVLVLTA
RDGWSDKVAAFKAGADDYLVKPVRVEELVIRLRALVRRSQGGGASRITCGPLSFDPGLGAFEHEGLPLKLTGLEWRVLSC
LMLNRETVVPRPHLIERVYEGDADVDSNSVEVIITRLRRKIAPARIESVRGHGYRLHAEPA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790552, Length=219, Percent_Identity=43.37899543379, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=39.8148148148148, Blast_Score=147, Evalue=4e-37,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=34.8623853211009, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=35.1111111111111, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=33.7837837837838, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=31.5555555555556, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=32.4324324324324, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=33.920704845815, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=32.8888888888889, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=26.6666666666667, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=30.7692307692308, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=29.3333333333333, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=25.4385964912281, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=27.0742358078603, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24054; Mature: 24054

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLVEDDAALAAEVAKVLRAENFVLDHAATGEDAQHLGETEGYDAVVLDLGLPKGDGV
CEEEEEECCHHHHHHHHHHHHHHCEEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCCCH
SVLRAWRAAGRTLPVLVLTARDGWSDKVAAFKAGADDYLVKPVRVEELVIRLRALVRRSQ
HHHHHHHHCCCEEEEEEEEECCCCCCCHHEEECCCCCCEECCCCHHHHHHHHHHHHHHCC
GGGASRITCGPLSFDPGLGAFEHEGLPLKLTGLEWRVLSCLMLNRETVVPRPHLIERVYE
CCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHC
GDADVDSNSVEVIITRLRRKIAPARIESVRGHGYRLHAEPA
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCC
>Mature Secondary Structure
MKILLVEDDAALAAEVAKVLRAENFVLDHAATGEDAQHLGETEGYDAVVLDLGLPKGDGV
CEEEEEECCHHHHHHHHHHHHHHCEEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCCCH
SVLRAWRAAGRTLPVLVLTARDGWSDKVAAFKAGADDYLVKPVRVEELVIRLRALVRRSQ
HHHHHHHHCCCEEEEEEEEECCCCCCCHHEEECCCCCCEECCCCHHHHHHHHHHHHHHCC
GGGASRITCGPLSFDPGLGAFEHEGLPLKLTGLEWRVLSCLMLNRETVVPRPHLIERVYE
CCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHC
GDADVDSNSVEVIITRLRRKIAPARIESVRGHGYRLHAEPA
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]