| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747010
Identifier: 170747010
GI number: 170747010
Start: 623401
End: 623886
Strand: Reverse
Name: 170747010
Synonym: Mrad2831_0576
Alternate gene names: NA
Gene position: 623886-623401 (Counterclockwise)
Preceding gene: 170747015
Following gene: 170747009
Centisome position: 10.26
GC content: 69.96
Gene sequence:
>486_bases ATGCTCGGCTTCCTCGGTGTCACGGCACTCTTGAAGCTGCGTGACGGCGCGCGGTCGGTGCCGGTAGCACTCGCCATCGC GCCGGCGCCGGAGCCGGATCTCGCGGGCGCTGCCGTCGCCGGCGTAGCCCTCCAGGCCGGCCGCAACGGCCACTTCTTCG TCAACGCCCTCGTGGACGGCCGTTCGCTGCCGATGATGGTGGATACGGGGGCGAGCGCCTGCGCGTTCTCGGAGGAGGAC GCCGCGCGGATCGGGATCCAGGTCGGACCGTCCGATTTCACGCGCGTCTGGAATACCGCCAACGGGACGGTCCGCGTCGC GCCGATCCGGATCGCGATCGTGCAGATCGGATCGATCACGGTGCGGGACGTCGACGCGGTCGTGATCCCGCGCGGGCTCC TGTCGACCAGCCTGTTGGGCATGTCGTTCCTGAGGCGCCTGCGCGATTTCGGCGTCTCCGGCAGCACGATGACGCTCAGG GGCTGA
Upstream 100 bases:
>100_bases CACGGCTCTGGCATCTCATCGCTGGGATCCGGGAACTCCGCGGATCGCCGCCACTCCACGTCACGGGCGAATTCGCGTGC GCAAAATCCTCTTGATCTGC
Downstream 100 bases:
>100_bases AACGCGCGCGATGCGTGCAGATCTCCGGGCCGCGGCAGGACGGCTGGAAGGCCGCCCGGCTTGCCTTCCGAGATCGATCA GGGGAGCCGGTCGACCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLGFLGVTALLKLRDGARSVPVALAIAPAPEPDLAGAAVAGVALQAGRNGHFFVNALVDGRSLPMMVDTGASACAFSEED AARIGIQVGPSDFTRVWNTANGTVRVAPIRIAIVQIGSITVRDVDAVVIPRGLLSTSLLGMSFLRRLRDFGVSGSTMTLR G
Sequences:
>Translated_161_residues MLGFLGVTALLKLRDGARSVPVALAIAPAPEPDLAGAAVAGVALQAGRNGHFFVNALVDGRSLPMMVDTGASACAFSEED AARIGIQVGPSDFTRVWNTANGTVRVAPIRIAIVQIGSITVRDVDAVVIPRGLLSTSLLGMSFLRRLRDFGVSGSTMTLR G >Mature_161_residues MLGFLGVTALLKLRDGARSVPVALAIAPAPEPDLAGAAVAGVALQAGRNGHFFVNALVDGRSLPMMVDTGASACAFSEED AARIGIQVGPSDFTRVWNTANGTVRVAPIRIAIVQIGSITVRDVDAVVIPRGLLSTSLLGMSFLRRLRDFGVSGSTMTLR G
Specific function: Unknown
COG id: COG3577
COG function: function code R; Predicted aspartyl protease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011969 - InterPro: IPR021109 - InterPro: IPR001969 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16672; Mature: 16672
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGFLGVTALLKLRDGARSVPVALAIAPAPEPDLAGAAVAGVALQAGRNGHFFVNALVDG CCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHEECCCCCCEEEEEEECC RSLPMMVDTGASACAFSEEDAARIGIQVGPSDFTRVWNTANGTVRVAPIRIAIVQIGSIT CCCCEEEECCCCEEEECCCCCEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEEEEECCEE VRDVDAVVIPRGLLSTSLLGMSFLRRLRDFGVSGSTMTLRG EECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MLGFLGVTALLKLRDGARSVPVALAIAPAPEPDLAGAAVAGVALQAGRNGHFFVNALVDG CCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHEECCCCCCEEEEEEECC RSLPMMVDTGASACAFSEEDAARIGIQVGPSDFTRVWNTANGTVRVAPIRIAIVQIGSIT CCCCEEEECCCCEEEECCCCCEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEEEEECCEE VRDVDAVVIPRGLLSTSLLGMSFLRRLRDFGVSGSTMTLRG EECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1917841 [H]