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The map label for this gene is pqqE

Identifier: 170746950

GI number: 170746950

Start: 552815

End: 553960

Strand: Reverse

Name: pqqE

Synonym: Mrad2831_0516

Alternate gene names: 170746950

Gene position: 553960-552815 (Counterclockwise)

Preceding gene: 170746951

Following gene: 170746949

Centisome position: 9.11

GC content: 69.81

Gene sequence:

>1146_bases
ATGAACGCGCCGACGCCGAACCGCCCCGATGCGCCGGCACCGGTCGGTCTGCTCGCCGAGCTGACCCACCGCTGCCCGCT
GCGCTGCCCGTACTGCTCGAACCCGCTGGAGCTCGACCGCCGGTCGGGCGAGCTCGACACGCAGACTTGGCAGCGCGTCC
TCGGGGAGGCCGCGGCGCTCGGCGTCCTGCACGTGCACCTGTCCGGCGGAGAGCCGACCGCCCGCAACGACATCGTCGAG
ATCACCAAGACCTGCGCCGATCTCGGCCTGTACTCCAACCTGATCACCTCCGGCGTCGGCGGGGCGCTGGCGAAGCTCCA
GGCGCTCTACGACGTCGGGCTCGACCACGTGCAGCTGTCGGTGCAGGGCGTCGACGCGCAGAACGCCGAGAAGATCGGCG
GCCTGAAGAACGCGCAGCCGCAGAAGTTCGAGTTCGCCGCCAAGGTGGTCGAACTCGGCCTGCCCCTCACGCTGAATTCG
GTGATTCACCGCGGCAACATCCACGAGGTGGCGGGCTTCATCGATCTCGCGGTGAAGATGGGCGCCAAGCGGCTCGAGGT
GGCGCACACGCAGTATTACGGCTGGGCCTACGTCAACCGCGCCGCCCTGATGCCCGACAAGGCGCAGGTCGACGAGTCGA
TCCGGATCGTCGAGGCGGCCCGCGAGCGCCTGAAGGGCCAGCTCGTCATCGACCTCGTCGTGCCCGACTACTACGCGAAG
TACCCGAAGGCCTGCGCGGGCGGCTGGGGCCGCAAGCTCATGAACGTCACGCCGCAGGGCAAGGTTCTGCCGTGCCACGC
GGCTGAGACGATCCCGGGGCTGGAGTTCTGGAACGTCAACGACCACGCCCTCGGCGAGATCTGGCGCGACTCCCCCGCCT
TCACGGCCTATCGCGGCACGGACTGGATGAAGGAGCCCTGCCGATCCTGCGACCGACGCGAGAAGGACTGGGGCGGCTGC
CGCTGCCAAGCGCTCGCGCTCGCGGGCGACGCGGCCGCCACGGATCCGGCCTGCTCGCTCTCGCCGCTCCACGCCAAGGT
GCGGGCGCTGGCCACCGAGGAGGCGGCCGAGAACCCGCCCGACTACGTCTACCGGACGATCGGCAGCAACGTCCGGTCGC
CGCTCAAGGAGGAAGTGAACTCGTGA

Upstream 100 bases:

>100_bases
CGGACGAGTTGGGCAAGACCTATGCGGCCGATCCGCGCGCCATCGAGGCGGACATCCTGGTGATGCTCGACGGCCTCGCG
GAGAAACGGGTTCTCGAGCG

Downstream 100 bases:

>100_bases
GAAGTCTTGTCGTGAGGAGCCTCGCGGCGACGTCGGTCGCGCTGGTTCTGGCCGCGCTGCCGGCCCTCGCCGAGGACGCG
CCGAAGCCCGCCACCGTCAC

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNAPTPNRPDAPAPVGLLAELTHRCPLRCPYCSNPLELDRRSGELDTQTWQRVLGEAAALGVLHVHLSGGEPTARNDIVE
ITKTCADLGLYSNLITSGVGGALAKLQALYDVGLDHVQLSVQGVDAQNAEKIGGLKNAQPQKFEFAAKVVELGLPLTLNS
VIHRGNIHEVAGFIDLAVKMGAKRLEVAHTQYYGWAYVNRAALMPDKAQVDESIRIVEAARERLKGQLVIDLVVPDYYAK
YPKACAGGWGRKLMNVTPQGKVLPCHAAETIPGLEFWNVNDHALGEIWRDSPAFTAYRGTDWMKEPCRSCDRREKDWGGC
RCQALALAGDAAATDPACSLSPLHAKVRALATEEAAENPPDYVYRTIGSNVRSPLKEEVNS

Sequences:

>Translated_381_residues
MNAPTPNRPDAPAPVGLLAELTHRCPLRCPYCSNPLELDRRSGELDTQTWQRVLGEAAALGVLHVHLSGGEPTARNDIVE
ITKTCADLGLYSNLITSGVGGALAKLQALYDVGLDHVQLSVQGVDAQNAEKIGGLKNAQPQKFEFAAKVVELGLPLTLNS
VIHRGNIHEVAGFIDLAVKMGAKRLEVAHTQYYGWAYVNRAALMPDKAQVDESIRIVEAARERLKGQLVIDLVVPDYYAK
YPKACAGGWGRKLMNVTPQGKVLPCHAAETIPGLEFWNVNDHALGEIWRDSPAFTAYRGTDWMKEPCRSCDRREKDWGGC
RCQALALAGDAAATDPACSLSPLHAKVRALATEEAAENPPDYVYRTIGSNVRSPLKEEVNS
>Mature_381_residues
MNAPTPNRPDAPAPVGLLAELTHRCPLRCPYCSNPLELDRRSGELDTQTWQRVLGEAAALGVLHVHLSGGEPTARNDIVE
ITKTCADLGLYSNLITSGVGGALAKLQALYDVGLDHVQLSVQGVDAQNAEKIGGLKNAQPQKFEFAAKVVELGLPLTLNS
VIHRGNIHEVAGFIDLAVKMGAKRLEVAHTQYYGWAYVNRAALMPDKAQVDESIRIVEAARERLKGQLVIDLVVPDYYAK
YPKACAGGWGRKLMNVTPQGKVLPCHAAETIPGLEFWNVNDHALGEIWRDSPAFTAYRGTDWMKEPCRSCDRREKDWGGC
RCQALALAGDAAATDPACSLSPLHAKVRALATEEAAENPPDYVYRTIGSNVRSPLKEEVNS

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQE_METRJ (B1LUE7)

Other databases:

- EMBL:   CP001001
- RefSeq:   YP_001753210.1
- ProteinModelPortal:   B1LUE7
- GeneID:   6136529
- GenomeReviews:   CP001001_GR
- KEGG:   mrd:Mrad2831_0516
- HOGENOM:   HBG289337
- OMA:   NVQYYGW
- ProtClustDB:   PRK05301
- HAMAP:   MF_00660
- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197
- Gene3D:   G3DSA:3.20.20.70
- PIRSF:   PIRSF037420
- SMART:   SM00729
- TIGRFAMs:   TIGR02109

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 41422; Mature: 41422

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPTPNRPDAPAPVGLLAELTHRCPLRCPYCSNPLELDRRSGELDTQTWQRVLGEAAAL
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHE
GVLHVHLSGGEPTARNDIVEITKTCADLGLYSNLITSGVGGALAKLQALYDVGLDHVQLS
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
VQGVDAQNAEKIGGLKNAQPQKFEFAAKVVELGLPLTLNSVIHRGNIHEVAGFIDLAVKM
EECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEEHHHHHHCCCHHHHHHHHHHHHHH
GAKRLEVAHTQYYGWAYVNRAALMPDKAQVDESIRIVEAARERLKGQLVIDLVVPDYYAK
CCHHHHHHHHHHHCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
YPKACAGGWGRKLMNVTPQGKVLPCHAAETIPGLEFWNVNDHALGEIWRDSPAFTAYRGT
CCCHHCCCHHHHHHCCCCCCCEEECCCHHCCCCCEEECCCCHHHHHHHCCCCCEEEECCC
DWMKEPCRSCDRREKDWGGCRCQALALAGDAAATDPACSLSPLHAKVRALATEEAAENPP
HHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
DYVYRTIGSNVRSPLKEEVNS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAPTPNRPDAPAPVGLLAELTHRCPLRCPYCSNPLELDRRSGELDTQTWQRVLGEAAAL
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHE
GVLHVHLSGGEPTARNDIVEITKTCADLGLYSNLITSGVGGALAKLQALYDVGLDHVQLS
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
VQGVDAQNAEKIGGLKNAQPQKFEFAAKVVELGLPLTLNSVIHRGNIHEVAGFIDLAVKM
EECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEEHHHHHHCCCHHHHHHHHHHHHHH
GAKRLEVAHTQYYGWAYVNRAALMPDKAQVDESIRIVEAARERLKGQLVIDLVVPDYYAK
CCHHHHHHHHHHHCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
YPKACAGGWGRKLMNVTPQGKVLPCHAAETIPGLEFWNVNDHALGEIWRDSPAFTAYRGT
CCCHHCCCHHHHHHCCCCCCCEEECCCHHCCCCCEEECCCCHHHHHHHCCCCCEEEECCC
DWMKEPCRSCDRREKDWGGCRCQALALAGDAAATDPACSLSPLHAKVRALATEEAAENPP
HHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
DYVYRTIGSNVRSPLKEEVNS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA