| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is purN [H]
Identifier: 170746924
GI number: 170746924
Start: 523891
End: 524541
Strand: Reverse
Name: purN [H]
Synonym: Mrad2831_0490
Alternate gene names: 170746924
Gene position: 524541-523891 (Counterclockwise)
Preceding gene: 170746925
Following gene: 170746921
Centisome position: 8.63
GC content: 74.81
Gene sequence:
>651_bases ATGGCGGCCGCCCGCAAGACCCGCGTCGCCGTCCTGATCTCGGGGCGCGGTTCGAACATGGTCGCGCTGCTCGAGGCCGC GAAGGATCCCGCCTTCCCGGCCGAGATCGTGCTGGTCCTGTCGAACCGCCCGGCGGCCGCCGGCCTCGCCCGGGCGGCCG CGGCTGGCATCCCGACGCAGGCGATCGATCACCGGGCCTTCGCCGACCGGGCCGGCTTCGACGCCGCCCTCGACGCGGCG CTGCGGGCGGCCGAGATCGACCTCGTCTGCCTCGCGGGTTTCATGCGGATCCTCACGACGGAGTTCGTGGCGTCCTGGGC CGGCCGGATGCTCAACATCCACCCGTCGCTCCTGCCCCTGTTCAAGGGCACGCACACCCACCGGCAGGCGCTGGACGCGG GCGTGCGCCTGCACGGCTGCACGGTCCACTTCGTCGTGCCGGAGCTCGATGCCGGCCCGATCGTCGCCCAGGCCGCGATC CCCGTCCGCCAGGACGACGATCCCGACAGCCTCGCCGACCGGGTGATCGTGCAGGAGCGCCGCCTCTACCCGGCGGTGCT CGCCCTCGTGGCGGGCGGCCGCGCCCGCCTGGAGGGCGAGCGCGTGGTCATCGCCGACGCGGCGCCGGACGGCGCGCTGT TCAGCGTCTAG
Upstream 100 bases:
>100_bases ACGAGGCGTTGACCCGGGCCGGCGAGACCCCGGTCCGCCTCGGGCGGATCACGGCGCGCGGGCCCGAGCCGGTCACCTTC GCCGGCCGCCTCGCCCTCTG
Downstream 100 bases:
>100_bases CGGGCGGCAGCACGGGCGTTTCCGTCCTGGCGCGCGGGGCGAAGCTATCCGGTAACGCCACGCTCGCCGACGTCTTGCTC AACGGGTTGCTGCGCTCCGC
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAAARKTRVAVLISGRGSNMVALLEAAKDPAFPAEIVLVLSNRPAAAGLARAAAAGIPTQAIDHRAFADRAGFDAALDAA LRAAEIDLVCLAGFMRILTTEFVASWAGRMLNIHPSLLPLFKGTHTHRQALDAGVRLHGCTVHFVVPELDAGPIVAQAAI PVRQDDDPDSLADRVIVQERRLYPAVLALVAGGRARLEGERVVIADAAPDGALFSV
Sequences:
>Translated_216_residues MAAARKTRVAVLISGRGSNMVALLEAAKDPAFPAEIVLVLSNRPAAAGLARAAAAGIPTQAIDHRAFADRAGFDAALDAA LRAAEIDLVCLAGFMRILTTEFVASWAGRMLNIHPSLLPLFKGTHTHRQALDAGVRLHGCTVHFVVPELDAGPIVAQAAI PVRQDDDPDSLADRVIVQERRLYPAVLALVAGGRARLEGERVVIADAAPDGALFSV >Mature_215_residues AAARKTRVAVLISGRGSNMVALLEAAKDPAFPAEIVLVLSNRPAAAGLARAAAAGIPTQAIDHRAFADRAGFDAALDAAL RAAEIDLVCLAGFMRILTTEFVASWAGRMLNIHPSLLPLFKGTHTHRQALDAGVRLHGCTVHFVVPELDAGPIVAQAAIP VRQDDDPDSLADRVIVQERRLYPAVLALVAGGRARLEGERVVIADAAPDGALFSV
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=193, Percent_Identity=52.3316062176166, Blast_Score=217, Evalue=5e-57, Organism=Homo sapiens, GI209869995, Length=193, Percent_Identity=52.3316062176166, Blast_Score=217, Evalue=5e-57, Organism=Homo sapiens, GI209869993, Length=193, Percent_Identity=52.3316062176166, Blast_Score=217, Evalue=5e-57, Organism=Escherichia coli, GI1788846, Length=202, Percent_Identity=45.5445544554455, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1787483, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17567511, Length=188, Percent_Identity=43.0851063829787, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320616, Length=174, Percent_Identity=33.9080459770115, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582400, Length=202, Percent_Identity=50, Blast_Score=201, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 22673; Mature: 22542
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAARKTRVAVLISGRGSNMVALLEAAKDPAFPAEIVLVLSNRPAAAGLARAAAAGIPTQ CCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHH AIDHRAFADRAGFDAALDAALRAAEIDLVCLAGFMRILTTEFVASWAGRMLNIHPSLLPL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHH FKGTHTHRQALDAGVRLHGCTVHFVVPELDAGPIVAQAAIPVRQDDDPDSLADRVIVQER HCCCCHHHHHHHCCCEEECEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH RLYPAVLALVAGGRARLEGERVVIADAAPDGALFSV HHHHHHHHHHCCCCCEECCCEEEEEECCCCCCEECC >Mature Secondary Structure AAARKTRVAVLISGRGSNMVALLEAAKDPAFPAEIVLVLSNRPAAAGLARAAAAGIPTQ CCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHH AIDHRAFADRAGFDAALDAALRAAEIDLVCLAGFMRILTTEFVASWAGRMLNIHPSLLPL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHH FKGTHTHRQALDAGVRLHGCTVHFVVPELDAGPIVAQAAIPVRQDDDPDSLADRVIVQER HCCCCHHHHHHHCCCEEECEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH RLYPAVLALVAGGRARLEGERVVIADAAPDGALFSV HHHHHHHHHHCCCCCEECCCEEEEEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]