| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ydhK [C]
Identifier: 170746918
GI number: 170746918
Start: 518693
End: 520732
Strand: Reverse
Name: ydhK [C]
Synonym: Mrad2831_0484
Alternate gene names: 170746918
Gene position: 520732-518693 (Counterclockwise)
Preceding gene: 170746919
Following gene: 170746917
Centisome position: 8.57
GC content: 73.14
Gene sequence:
>2040_bases ATGGCTGAGGCCCCCGCCGCATCCGCCGCGGATCGCCGCGCCGAACCGTTCGTCGACCGCGTCGTGGCGTTCCTCGATGC CTGGGTGCCGAAGCCGGCCGCCTGGGCCTTCGCGCTGCGGATCTGGATCGCCATGATGCTGGCACTGGCCGCCGCCTTCT GGCTCCAGCTCGACAGCGCCTCGTCCGCCGCCACCTGCGTGGCGATCCTCGCCCAGCCCAAGCGCGGGCAGGCGATCTCG AAGGCGGTCTACCGCCTCCTCGGTACGCTGATCGGCGCCGTGGTGGCGCTCGTCTTCATGGCCCTGTTCGGCCAGGACCG GGTGCTGCTGCTCCTCAGCTTCACCGTGTGGCTCGGCCTCTGCGTCTTCGTCGCCCAGTTCCTGCAAGACACGCGGGCCT ACGGCGCGATGCTGTCCGGCTACACCGTGGCGATCATCGCGCTGGGTCAGATCGACGAGCCGCAGGGCACCTTCGACGCC GCCGTGTCCCGCGTCGCCGTGATCGTGCTCGGCATCGTCGTGATCACCTTCATCAACGACGCCCTCGCCTCGCCGAGCAC GTGGCGGGCCCTGCTGCCGCAATTGCGCGAAGCCTGGGACGAGACGCGCGGCTACGCCCGCGAGACGCTGGCGGTGGGCG ACCTCGGCGCCACGCGCACCGCCGCGCTGATCCGCGCCATCGCGCCGATGCGGGCCGATGCCAGCGCCATCGCGGGCGAA CTGGACGACGGCCGGTACCGCGCGGCCGGCGCGCGCAGCTGCATCGCCGCGCTCTACGTGATGGCGGCCGCGATCCGCAG CCTCGGGGCCGCGGCGGCCGGCCTGCGCAACCCGAGCCCGGCCGTCGCGGAGGCGATGGCGATCTGCCGGCGGGTGGCCG ACGCACCGGATCCCGACGCCCTCGACCGCGACGACGAGCGCCTGCGCGACCTGATCGACGCGGCCATCCGCGACGGGACC CGCCCCCTCGACGAGGTGGTGGTGCTTCAGCGCGCCCTCGACTTCGTCTGCGCCGCGACCTTCGCGCAGGACGGCATTCG TGCCGTCGCCGACGGCCACCGGCCGCTGCGCGACGCCGCGCTGCCGACCCATCGCGACTTCCCGGTCGCCGTGCGCGGTG CCCTGCGGGTCGCCCTGAGCTTCGCGGTGACCGCCGCCACCTTCGTGGCGCTCGGCCTGCCGCAGGCCTCCTTCGCGCTG GTCCAAGTGGCCGCCACCGCGGCGCTCTCGTCGGTCACGCCGGATCCGAAGAAGTTCGCCAACGGGGTCGTCATCGGGAT GACCCTTGCCGCCACCTTCGCGGGCATCGCCCGGTTCGCGCTCCTCAACGGTGTCCAGGGCTTCCCGATGCTGGCCATGG TGATGGCCCCCGTGATCTTCCTCGGCTGCTTCCTGTCGCTGAACCCGAAGACCTTCGGCATCGGCTTCATCGTGATCGTC TTCTTCCCCGTGCTGCTCGGGCCCTCGAATCCCCAGTCGTACGATGCGCTGACCTTCCTCCTGAACGCCTTCCTGGTGGT CGTCGCGGCCGTGATCCTGTCGATCGTCGTCCGCCTCATCCTGCCGATCACGCCCGCCCAGCAGCGGGTCTTCGCCCTGG ATTCGGCGCGGCGCGCGCTCGCCGACGCCCTCGTCGGCCAGGGGGGCGACGCCACCACCCGCACCAGCCTGAACGCCGAC CGGCTGTTCCAGTTCGCGAATTACAGCTCGGGGAGCGGCGCCGTGCGGCGGGCGAACCTGCACCACGCCTTCGCCCTCGC CCGGCTGGAGGCCGCCGCCGCCCGCGCCCACGCGGAGCTGCGCCGCCTCTGGTCGATCGGGGCCCTGCGCGGCGCGATCC CGCGGGCGCGGGACGCCCTGGCGGCCGGCGACGATCGCGGCCTCGAGACGGCGGCGCGCGAGCTGATCCGCGCCGCGTCC GGCCAGGACCGGGCGGTGCGGCTGACGACGGCCCGCGCCGCCAGCGACCTCGTCACAGCGTCGCGAACCATCACCCGCCA CCGGCGATTCCTCCATCGCCTCGACGTCGCGCTATTCTGA
Upstream 100 bases:
>100_bases TCGTTCAGACATCCGCGGCGCGTTGGCGGGAGACACGAGGCGATGACGGACCCTTCTCCGTCCGGACGGGCGGTGGACAG CGCGCCGCGCCCGGTCCGGC
Downstream 100 bases:
>100_bases CGGCCGCTTCTTCCGGAATCACCATGCACGAGGACATCCATGTCGGCGGAGTGCTGGTCACGGCCTTCGTCGCTTACGCG CTGGCCGCCTTCGTGATCCT
Product: fusaric acid resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MAEAPAASAADRRAEPFVDRVVAFLDAWVPKPAAWAFALRIWIAMMLALAAAFWLQLDSASSAATCVAILAQPKRGQAIS KAVYRLLGTLIGAVVALVFMALFGQDRVLLLLSFTVWLGLCVFVAQFLQDTRAYGAMLSGYTVAIIALGQIDEPQGTFDA AVSRVAVIVLGIVVITFINDALASPSTWRALLPQLREAWDETRGYARETLAVGDLGATRTAALIRAIAPMRADASAIAGE LDDGRYRAAGARSCIAALYVMAAAIRSLGAAAAGLRNPSPAVAEAMAICRRVADAPDPDALDRDDERLRDLIDAAIRDGT RPLDEVVVLQRALDFVCAATFAQDGIRAVADGHRPLRDAALPTHRDFPVAVRGALRVALSFAVTAATFVALGLPQASFAL VQVAATAALSSVTPDPKKFANGVVIGMTLAATFAGIARFALLNGVQGFPMLAMVMAPVIFLGCFLSLNPKTFGIGFIVIV FFPVLLGPSNPQSYDALTFLLNAFLVVVAAVILSIVVRLILPITPAQQRVFALDSARRALADALVGQGGDATTRTSLNAD RLFQFANYSSGSGAVRRANLHHAFALARLEAAAARAHAELRRLWSIGALRGAIPRARDALAAGDDRGLETAARELIRAAS GQDRAVRLTTARAASDLVTASRTITRHRRFLHRLDVALF
Sequences:
>Translated_679_residues MAEAPAASAADRRAEPFVDRVVAFLDAWVPKPAAWAFALRIWIAMMLALAAAFWLQLDSASSAATCVAILAQPKRGQAIS KAVYRLLGTLIGAVVALVFMALFGQDRVLLLLSFTVWLGLCVFVAQFLQDTRAYGAMLSGYTVAIIALGQIDEPQGTFDA AVSRVAVIVLGIVVITFINDALASPSTWRALLPQLREAWDETRGYARETLAVGDLGATRTAALIRAIAPMRADASAIAGE LDDGRYRAAGARSCIAALYVMAAAIRSLGAAAAGLRNPSPAVAEAMAICRRVADAPDPDALDRDDERLRDLIDAAIRDGT RPLDEVVVLQRALDFVCAATFAQDGIRAVADGHRPLRDAALPTHRDFPVAVRGALRVALSFAVTAATFVALGLPQASFAL VQVAATAALSSVTPDPKKFANGVVIGMTLAATFAGIARFALLNGVQGFPMLAMVMAPVIFLGCFLSLNPKTFGIGFIVIV FFPVLLGPSNPQSYDALTFLLNAFLVVVAAVILSIVVRLILPITPAQQRVFALDSARRALADALVGQGGDATTRTSLNAD RLFQFANYSSGSGAVRRANLHHAFALARLEAAAARAHAELRRLWSIGALRGAIPRARDALAAGDDRGLETAARELIRAAS GQDRAVRLTTARAASDLVTASRTITRHRRFLHRLDVALF >Mature_678_residues AEAPAASAADRRAEPFVDRVVAFLDAWVPKPAAWAFALRIWIAMMLALAAAFWLQLDSASSAATCVAILAQPKRGQAISK AVYRLLGTLIGAVVALVFMALFGQDRVLLLLSFTVWLGLCVFVAQFLQDTRAYGAMLSGYTVAIIALGQIDEPQGTFDAA VSRVAVIVLGIVVITFINDALASPSTWRALLPQLREAWDETRGYARETLAVGDLGATRTAALIRAIAPMRADASAIAGEL DDGRYRAAGARSCIAALYVMAAAIRSLGAAAAGLRNPSPAVAEAMAICRRVADAPDPDALDRDDERLRDLIDAAIRDGTR PLDEVVVLQRALDFVCAATFAQDGIRAVADGHRPLRDAALPTHRDFPVAVRGALRVALSFAVTAATFVALGLPQASFALV QVAATAALSSVTPDPKKFANGVVIGMTLAATFAGIARFALLNGVQGFPMLAMVMAPVIFLGCFLSLNPKTFGIGFIVIVF FPVLLGPSNPQSYDALTFLLNAFLVVVAAVILSIVVRLILPITPAQQRVFALDSARRALADALVGQGGDATTRTSLNADR LFQFANYSSGSGAVRRANLHHAFALARLEAAAARAHAELRRLWSIGALRGAIPRARDALAAGDDRGLETAARELIRAASG QDRAVRLTTARAASDLVTASRTITRHRRFLHRLDVALF
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1787933, Length=548, Percent_Identity=25.3649635036496, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1789636, Length=521, Percent_Identity=23.8003838771593, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 71961; Mature: 71830
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAPAASAADRRAEPFVDRVVAFLDAWVPKPAAWAFALRIWIAMMLALAAAFWLQLDSA CCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSAATCVAILAQPKRGQAISKAVYRLLGTLIGAVVALVFMALFGQDRVLLLLSFTVWLGL CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CVFVAQFLQDTRAYGAMLSGYTVAIIALGQIDEPQGTFDAAVSRVAVIVLGIVVITFIND HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALASPSTWRALLPQLREAWDETRGYARETLAVGDLGATRTAALIRAIAPMRADASAIAGE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCC LDDGRYRAAGARSCIAALYVMAAAIRSLGAAAAGLRNPSPAVAEAMAICRRVADAPDPDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC LDRDDERLRDLIDAAIRDGTRPLDEVVVLQRALDFVCAATFAQDGIRAVADGHRPLRDAA CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC LPTHRDFPVAVRGALRVALSFAVTAATFVALGLPQASFALVQVAATAALSSVTPDPKKFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH NGVVIGMTLAATFAGIARFALLNGVQGFPMLAMVMAPVIFLGCFLSLNPKTFGIGFIVIV CCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FFPVLLGPSNPQSYDALTFLLNAFLVVVAAVILSIVVRLILPITPAQQRVFALDSARRAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ADALVGQGGDATTRTSLNADRLFQFANYSSGSGAVRRANLHHAFALARLEAAAARAHAEL HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRLWSIGALRGAIPRARDALAAGDDRGLETAARELIRAASGQDRAVRLTTARAASDLVTA HHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH SRTITRHRRFLHRLDVALF HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEAPAASAADRRAEPFVDRVVAFLDAWVPKPAAWAFALRIWIAMMLALAAAFWLQLDSA CCCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSAATCVAILAQPKRGQAISKAVYRLLGTLIGAVVALVFMALFGQDRVLLLLSFTVWLGL CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CVFVAQFLQDTRAYGAMLSGYTVAIIALGQIDEPQGTFDAAVSRVAVIVLGIVVITFIND HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALASPSTWRALLPQLREAWDETRGYARETLAVGDLGATRTAALIRAIAPMRADASAIAGE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCC LDDGRYRAAGARSCIAALYVMAAAIRSLGAAAAGLRNPSPAVAEAMAICRRVADAPDPDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC LDRDDERLRDLIDAAIRDGTRPLDEVVVLQRALDFVCAATFAQDGIRAVADGHRPLRDAA CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC LPTHRDFPVAVRGALRVALSFAVTAATFVALGLPQASFALVQVAATAALSSVTPDPKKFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH NGVVIGMTLAATFAGIARFALLNGVQGFPMLAMVMAPVIFLGCFLSLNPKTFGIGFIVIV CCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FFPVLLGPSNPQSYDALTFLLNAFLVVVAAVILSIVVRLILPITPAQQRVFALDSARRAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ADALVGQGGDATTRTSLNADRLFQFANYSSGSGAVRRANLHHAFALARLEAAAARAHAEL HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRLWSIGALRGAIPRARDALAAGDDRGLETAARELIRAASGQDRAVRLTTARAASDLVTA HHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH SRTITRHRRFLHRLDVALF HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]