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The map label for this gene is ydhJ [H]

Identifier: 170746916

GI number: 170746916

Start: 517420

End: 518475

Strand: Reverse

Name: ydhJ [H]

Synonym: Mrad2831_0482

Alternate gene names: 170746916

Gene position: 518475-517420 (Counterclockwise)

Preceding gene: 170746917

Following gene: 170746910

Centisome position: 8.53

GC content: 69.79

Gene sequence:

>1056_bases
ATGCCCGACACGACCGCCGACGAGGACGATCCGAAGTCCGCCTCCCGTGACAGCGCCCCCGGGCGGAGCGACCCGCTGCC
CGCGGTGCCGCGCCGGGGCCGCGCCGCCAAGGTGTTCCGCCTCGCGGCCACGGGCGCGATCCTGCTGGCGGCGATCGTCG
CGGCGGCCTTCGTGTGGGAATTCTACGTGGCGGCGCCCTGGACGCGCGACGGCACGGTCCGGGTGCAGGTCGCCAACATC
GCGCCCCAGGTCGCCGGGCAGATCGTCGAGGTCCGGGTTCAGGACAACCAGACCGTCCGCAAGGGCGACGTCCTCTACGT
CATCGATCCGGTCGACTTCGAGGTCGCGGTCACCTCGGCGGACGCCGAGGTGAAGAACCGCGAGGCCGACCTGCAGGTGA
AGAACGCCCAGTCAGCCCGCCGGCAGGCGCTCACGACCGTGTCGACCTCGATCGAGGAGAAGCAGCAATTCGCCGGCGCC
GCGAAGATCGCCGAGGCGTCGCTGGAGAGTGCCCAGGCGCAATTGCGGCAGGCCAAGGTGAACCTCGAGCGCACCCAGGT
GAAGTCCACCGTCAACGGCCGGGTGACCAACCTGCTGATGCGCGTCGGCGACTACGCCCGGACCGGCACCTCGAACATCA
GCGTAATCGACACCGATTCCTTCTGGATCGACGGCTATTTCGAGGAGACGAAGATGCCCAACATTCACGTCGGCGATCGC
GCCGACGTGAAGCTGATGGGCTTCGACCCGCACCTGACCGGCACGGTCCACAGCATCACGCTCGGCATCTCCACGGCGAA
CGCCGCCGCCAGCACGCAGGGATTGCCGGACGTAAACCCGGTCTACACCTGGGTCCGCCTCGCTCAGCGGGTGCCGGTCC
GCATCCGCATCGACCATGTCCCGGCGGGCGTCCCGCTCATCGCCGGCATGACCGCGACGGTGTTCGTCAATGGTGGCCGC
GGCCCGGCGCCGAACTGGTTCATGAACTTGCGCGACCGCGTCTCCGCTCTGACCACGCCGGCGGCCGGGCCGGCCCAGGA
GGCCGAGCGGCGCTGA

Upstream 100 bases:

>100_bases
TCTTCGCCCGCATCCACTTCAGCCGCTACGTCGCCAACGCCCCGCTCGCCGAGGCCGGCCTCTACGTCTGTGTCCTCGCC
CTCCTGATCGCGTTCATCTG

Downstream 100 bases:

>100_bases
ACCGTCGCCCGGGCGACCGCGCCCGCAGGCGCGGCGCCGGCGTGGTCGGCCAGGCAACACGTCCGATACGGCCGGCGGCG
ACGACCTGCGCGGCGGCACG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPDTTADEDDPKSASRDSAPGRSDPLPAVPRRGRAAKVFRLAATGAILLAAIVAAAFVWEFYVAAPWTRDGTVRVQVANI
APQVAGQIVEVRVQDNQTVRKGDVLYVIDPVDFEVAVTSADAEVKNREADLQVKNAQSARRQALTTVSTSIEEKQQFAGA
AKIAEASLESAQAQLRQAKVNLERTQVKSTVNGRVTNLLMRVGDYARTGTSNISVIDTDSFWIDGYFEETKMPNIHVGDR
ADVKLMGFDPHLTGTVHSITLGISTANAAASTQGLPDVNPVYTWVRLAQRVPVRIRIDHVPAGVPLIAGMTATVFVNGGR
GPAPNWFMNLRDRVSALTTPAAGPAQEAERR

Sequences:

>Translated_351_residues
MPDTTADEDDPKSASRDSAPGRSDPLPAVPRRGRAAKVFRLAATGAILLAAIVAAAFVWEFYVAAPWTRDGTVRVQVANI
APQVAGQIVEVRVQDNQTVRKGDVLYVIDPVDFEVAVTSADAEVKNREADLQVKNAQSARRQALTTVSTSIEEKQQFAGA
AKIAEASLESAQAQLRQAKVNLERTQVKSTVNGRVTNLLMRVGDYARTGTSNISVIDTDSFWIDGYFEETKMPNIHVGDR
ADVKLMGFDPHLTGTVHSITLGISTANAAASTQGLPDVNPVYTWVRLAQRVPVRIRIDHVPAGVPLIAGMTATVFVNGGR
GPAPNWFMNLRDRVSALTTPAAGPAQEAERR
>Mature_350_residues
PDTTADEDDPKSASRDSAPGRSDPLPAVPRRGRAAKVFRLAATGAILLAAIVAAAFVWEFYVAAPWTRDGTVRVQVANIA
PQVAGQIVEVRVQDNQTVRKGDVLYVIDPVDFEVAVTSADAEVKNREADLQVKNAQSARRQALTTVSTSIEEKQQFAGAA
KIAEASLESAQAQLRQAKVNLERTQVKSTVNGRVTNLLMRVGDYARTGTSNISVIDTDSFWIDGYFEETKMPNIHVGDRA
DVKLMGFDPHLTGTVHSITLGISTANAAASTQGLPDVNPVYTWVRLAQRVPVRIRIDHVPAGVPLIAGMTATVFVNGGRG
PAPNWFMNLRDRVSALTTPAAGPAQEAERR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=280, Percent_Identity=39.2857142857143, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1789637, Length=283, Percent_Identity=36.3957597173145, Blast_Score=177, Evalue=7e-46,
Organism=Escherichia coli, GI1790519, Length=290, Percent_Identity=28.9655172413793, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789041, Length=345, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788711, Length=333, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37803; Mature: 37672

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTTADEDDPKSASRDSAPGRSDPLPAVPRRGRAAKVFRLAATGAILLAAIVAAAFVWE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHH
FYVAAPWTRDGTVRVQVANIAPQVAGQIVEVRVQDNQTVRKGDVLYVIDPVDFEVAVTSA
HHHCCCCCCCCEEEEEEECCCHHHCCEEEEEEECCCCEEECCCEEEEECCCCEEEEEECC
DAEVKNREADLQVKNAQSARRQALTTVSTSIEEKQQFAGAAKIAEASLESAQAQLRQAKV
CCHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLERTQVKSTVNGRVTNLLMRVGDYARTGTSNISVIDTDSFWIDGYFEETKMPNIHVGDR
CHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCEEECCEECCCCCCCEECCCC
ADVKLMGFDPHLTGTVHSITLGISTANAAASTQGLPDVNPVYTWVRLAQRVPVRIRIDHV
CCEEEEECCCCCCCEEEEEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECC
PAGVPLIAGMTATVFVNGGRGPAPNWFMNLRDRVSALTTPAAGPAQEAERR
CCCCHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCC
>Mature Secondary Structure 
PDTTADEDDPKSASRDSAPGRSDPLPAVPRRGRAAKVFRLAATGAILLAAIVAAAFVWE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHH
FYVAAPWTRDGTVRVQVANIAPQVAGQIVEVRVQDNQTVRKGDVLYVIDPVDFEVAVTSA
HHHCCCCCCCCEEEEEEECCCHHHCCEEEEEEECCCCEEECCCEEEEECCCCEEEEEECC
DAEVKNREADLQVKNAQSARRQALTTVSTSIEEKQQFAGAAKIAEASLESAQAQLRQAKV
CCHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLERTQVKSTVNGRVTNLLMRVGDYARTGTSNISVIDTDSFWIDGYFEETKMPNIHVGDR
CHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCEEECCEECCCCCCCEECCCC
ADVKLMGFDPHLTGTVHSITLGISTANAAASTQGLPDVNPVYTWVRLAQRVPVRIRIDHV
CCEEEEECCCCCCCEEEEEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECC
PAGVPLIAGMTATVFVNGGRGPAPNWFMNLRDRVSALTTPAAGPAQEAERR
CCCCHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]