Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yliI [C]

Identifier: 170746706

GI number: 170746706

Start: 275908

End: 277248

Strand: Reverse

Name: yliI [C]

Synonym: Mrad2831_0257

Alternate gene names: 170746706

Gene position: 277248-275908 (Counterclockwise)

Preceding gene: 170746707

Following gene: 170746705

Centisome position: 4.56

GC content: 70.32

Gene sequence:

>1341_bases
ATGATCCGGCGCGTCCCGCTCCTCGCCGCCGGCGTTCTGCTTCCGCTCGCCGCCTGCGGGCCCGATCCCATCGACCCGCA
GACCCAGGTCGGACCGAACCCGCCACTGCCCGATCTGCATCAGTACCTGCTGCAGCCGATGCACGTCTCGAGCGCGGTCG
GCTGGAAGGACGGCGAGACGCCCGAGGGCGCATCCGGGCTGCAAGTGAAGGCCCTCGCAACGGGCCTGAAGAACCCGCGC
TCGCTCCTCGTCCTGCCCAACGGCGATGTCCTGGTGGCGGAGAGCGGCGGCCCGACGCCGCCGATCAACCGGCCCAAGGA
GATCATCATGGGCTGGCTCGAGCGGAAGTCCCATTCCGCGGAGACCCCGGGTCAGCGCATCACCCTGCTGCGGGATGCCG
ACGGCGACGGCGTCGCCGAGCAGCGGACCGTGCTGCTCGACAAGCAGAACGCGCCCTTCGGCATGGTGCTGGTCGGCGGC
GACCTCTACGTCGCGGAGACCGACGCGGTCGTGCGCTACCCCTACAAGTCCGGCGACACCGCGATCACCGAGCCGGGCGT
GAAGCTCGTGGACCTGCCGGCGGGCCGCATCAATCACCACTGGACCAAGAGCCTGACCGCGAGCCCGGACGGCTCCAAGC
TCTACGCCGGCGTCGGATCGAACAGCAACATCACGGAGAACGGGCTGGACGAGGAGAAGGACCGGGCCGCAATCTGGGAG
ATCGACCGGACATCCGGCGCGCACCGGCTCTACGCCACGGGCCTGCGCAATCCCAACGGCCTGACCGTCGAGCCGCAGAC
CGAGACCCTGTGGTGCGTGGTCAATGAGCGCGACGAGCTCGGGCCCGACCTCGTGCCCGACTACATGACCTCGGTGAAGG
ATGGCGGCTTCTACGGCTGGCCCTACAGCTACTGGGGCAACCACGTCGATCCGCGGGTGATGCCGCAGCGTCCGGACCTG
GTCGCCGCCGCACTCATGCCCGACTACGCGCTGAGTTCGCACGTGGCGCCCCTGGGAATGACCTTCTCCAGCGGCGCGGG
TCTGCCGCAGGCCTATCGTGCCGGCGCCTTCGTGGGCGAGCACGGCAGCTGGAACCGTGAGCCGCTGAACGGCTACAAGG
TGGTCTACATCCCCTTCGAGAACGGCCGGCCGGCCGGTAAGGCCCAGGACGTGGTGACCGGCTTCCTCACGGATGACGGA
CACGCTCGCGGGCGCCCGGTCGGGCTGGCGATGGACGGTCACGGCGCGCTGCTCATCGCCGACGATGCCGGCGGCGCCGT
GTGGCGCGTCACCGCCTCCGGCTCGCAGACGCGGGCCGAGCCGGCCCCGATCGTCCGCTGA

Upstream 100 bases:

>100_bases
TCCTGTCGACCGTCGTCGTGCTGATCCTGCTGGTCACTGGCTGGAGCGGCGCCGCGCTGGTGCACCGGCACGGTGTCGGC
GTGCGAACGGAGGAGCCGGC

Downstream 100 bases:

>100_bases
CCCGGTCCACGATCGAGATGTCAGTGCTGGAGAAGTGCCGATGACGCCATCGACCCGTTCACCCGCCGCGATCAGCGACG
AGGGGCGCCACGCCCGCGAC

Product: putative glucose/sorbosone dehydrogenase

Products: NA

Alternate protein names: SNDH [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGETPEGASGLQVKALATGLKNPR
SLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSAETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGG
DLYVAETDAVVRYPYKSGDTAITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE
IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGWPYSYWGNHVDPRVMPQRPDL
VAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGEHGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDG
HARGRPVGLAMDGHGALLIADDAGGAVWRVTASGSQTRAEPAPIVR

Sequences:

>Translated_446_residues
MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGETPEGASGLQVKALATGLKNPR
SLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSAETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGG
DLYVAETDAVVRYPYKSGDTAITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE
IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGWPYSYWGNHVDPRVMPQRPDL
VAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGEHGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDG
HARGRPVGLAMDGHGALLIADDAGGAVWRVTASGSQTRAEPAPIVR
>Mature_446_residues
MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGETPEGASGLQVKALATGLKNPR
SLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSAETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGG
DLYVAETDAVVRYPYKSGDTAITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE
IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGWPYSYWGNHVDPRVMPQRPDL
VAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGEHGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDG
HARGRPVGLAMDGHGALLIADDAGGAVWRVTASGSQTRAEPAPIVR

Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.burgdorferi BB024 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 47623; Mature: 47623

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGET
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCC
PEGASGLQVKALATGLKNPRSLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSA
CCCCCCCEEEEEHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC
ETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGGDLYVAETDAVVRYPYKSGDT
CCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCEEEEECCCCCCC
AITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE
EEECCCCEEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE
IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGW
EECCCCCCEEEEECCCCCCCCEECCCCCEEEEEECCHHHCCCCCCHHHHHHCCCCCEECC
PYSYWGNHVDPRVMPQRPDLVAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGE
CHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHHHCCCEEEC
HGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDGHARGRPVGLAMDGHGALLIA
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEE
DDAGGAVWRVTASGSQTRAEPAPIVR
ECCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGET
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCC
PEGASGLQVKALATGLKNPRSLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSA
CCCCCCCEEEEEHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC
ETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGGDLYVAETDAVVRYPYKSGDT
CCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCEEEEECCCCCCC
AITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE
EEECCCCEEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE
IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGW
EECCCCCCEEEEECCCCCCCCEECCCCCEEEEEECCHHHCCCCCCHHHHHHCCCCCEECC
PYSYWGNHVDPRVMPQRPDLVAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGE
CHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHHHCCCEEEC
HGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDGHARGRPVGLAMDGHGALLIA
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEE
DDAGGAVWRVTASGSQTRAEPAPIVR
ECCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7574579 [H]