| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yliI [C]
Identifier: 170746706
GI number: 170746706
Start: 275908
End: 277248
Strand: Reverse
Name: yliI [C]
Synonym: Mrad2831_0257
Alternate gene names: 170746706
Gene position: 277248-275908 (Counterclockwise)
Preceding gene: 170746707
Following gene: 170746705
Centisome position: 4.56
GC content: 70.32
Gene sequence:
>1341_bases ATGATCCGGCGCGTCCCGCTCCTCGCCGCCGGCGTTCTGCTTCCGCTCGCCGCCTGCGGGCCCGATCCCATCGACCCGCA GACCCAGGTCGGACCGAACCCGCCACTGCCCGATCTGCATCAGTACCTGCTGCAGCCGATGCACGTCTCGAGCGCGGTCG GCTGGAAGGACGGCGAGACGCCCGAGGGCGCATCCGGGCTGCAAGTGAAGGCCCTCGCAACGGGCCTGAAGAACCCGCGC TCGCTCCTCGTCCTGCCCAACGGCGATGTCCTGGTGGCGGAGAGCGGCGGCCCGACGCCGCCGATCAACCGGCCCAAGGA GATCATCATGGGCTGGCTCGAGCGGAAGTCCCATTCCGCGGAGACCCCGGGTCAGCGCATCACCCTGCTGCGGGATGCCG ACGGCGACGGCGTCGCCGAGCAGCGGACCGTGCTGCTCGACAAGCAGAACGCGCCCTTCGGCATGGTGCTGGTCGGCGGC GACCTCTACGTCGCGGAGACCGACGCGGTCGTGCGCTACCCCTACAAGTCCGGCGACACCGCGATCACCGAGCCGGGCGT GAAGCTCGTGGACCTGCCGGCGGGCCGCATCAATCACCACTGGACCAAGAGCCTGACCGCGAGCCCGGACGGCTCCAAGC TCTACGCCGGCGTCGGATCGAACAGCAACATCACGGAGAACGGGCTGGACGAGGAGAAGGACCGGGCCGCAATCTGGGAG ATCGACCGGACATCCGGCGCGCACCGGCTCTACGCCACGGGCCTGCGCAATCCCAACGGCCTGACCGTCGAGCCGCAGAC CGAGACCCTGTGGTGCGTGGTCAATGAGCGCGACGAGCTCGGGCCCGACCTCGTGCCCGACTACATGACCTCGGTGAAGG ATGGCGGCTTCTACGGCTGGCCCTACAGCTACTGGGGCAACCACGTCGATCCGCGGGTGATGCCGCAGCGTCCGGACCTG GTCGCCGCCGCACTCATGCCCGACTACGCGCTGAGTTCGCACGTGGCGCCCCTGGGAATGACCTTCTCCAGCGGCGCGGG TCTGCCGCAGGCCTATCGTGCCGGCGCCTTCGTGGGCGAGCACGGCAGCTGGAACCGTGAGCCGCTGAACGGCTACAAGG TGGTCTACATCCCCTTCGAGAACGGCCGGCCGGCCGGTAAGGCCCAGGACGTGGTGACCGGCTTCCTCACGGATGACGGA CACGCTCGCGGGCGCCCGGTCGGGCTGGCGATGGACGGTCACGGCGCGCTGCTCATCGCCGACGATGCCGGCGGCGCCGT GTGGCGCGTCACCGCCTCCGGCTCGCAGACGCGGGCCGAGCCGGCCCCGATCGTCCGCTGA
Upstream 100 bases:
>100_bases TCCTGTCGACCGTCGTCGTGCTGATCCTGCTGGTCACTGGCTGGAGCGGCGCCGCGCTGGTGCACCGGCACGGTGTCGGC GTGCGAACGGAGGAGCCGGC
Downstream 100 bases:
>100_bases CCCGGTCCACGATCGAGATGTCAGTGCTGGAGAAGTGCCGATGACGCCATCGACCCGTTCACCCGCCGCGATCAGCGACG AGGGGCGCCACGCCCGCGAC
Product: putative glucose/sorbosone dehydrogenase
Products: NA
Alternate protein names: SNDH [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGETPEGASGLQVKALATGLKNPR SLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSAETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGG DLYVAETDAVVRYPYKSGDTAITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGWPYSYWGNHVDPRVMPQRPDL VAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGEHGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDG HARGRPVGLAMDGHGALLIADDAGGAVWRVTASGSQTRAEPAPIVR
Sequences:
>Translated_446_residues MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGETPEGASGLQVKALATGLKNPR SLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSAETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGG DLYVAETDAVVRYPYKSGDTAITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGWPYSYWGNHVDPRVMPQRPDL VAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGEHGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDG HARGRPVGLAMDGHGALLIADDAGGAVWRVTASGSQTRAEPAPIVR >Mature_446_residues MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGETPEGASGLQVKALATGLKNPR SLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSAETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGG DLYVAETDAVVRYPYKSGDTAITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGWPYSYWGNHVDPRVMPQRPDL VAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGEHGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDG HARGRPVGLAMDGHGALLIADDAGGAVWRVTASGSQTRAEPAPIVR
Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.burgdorferi BB024 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR012938 - InterPro: IPR011041 [H]
Pfam domain/function: PF07995 GSDH [H]
EC number: NA
Molecular weight: Translated: 47623; Mature: 47623
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGET CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCC PEGASGLQVKALATGLKNPRSLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSA CCCCCCCEEEEEHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC ETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGGDLYVAETDAVVRYPYKSGDT CCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCEEEEECCCCCCC AITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE EEECCCCEEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGW EECCCCCCEEEEECCCCCCCCEECCCCCEEEEEECCHHHCCCCCCHHHHHHCCCCCEECC PYSYWGNHVDPRVMPQRPDLVAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGE CHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHHHCCCEEEC HGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDGHARGRPVGLAMDGHGALLIA CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEE DDAGGAVWRVTASGSQTRAEPAPIVR ECCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MIRRVPLLAAGVLLPLAACGPDPIDPQTQVGPNPPLPDLHQYLLQPMHVSSAVGWKDGET CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCC PEGASGLQVKALATGLKNPRSLLVLPNGDVLVAESGGPTPPINRPKEIIMGWLERKSHSA CCCCCCCEEEEEHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC ETPGQRITLLRDADGDGVAEQRTVLLDKQNAPFGMVLVGGDLYVAETDAVVRYPYKSGDT CCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCEEEEECCCCCCC AITEPGVKLVDLPAGRINHHWTKSLTASPDGSKLYAGVGSNSNITENGLDEEKDRAAIWE EEECCCCEEEECCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE IDRTSGAHRLYATGLRNPNGLTVEPQTETLWCVVNERDELGPDLVPDYMTSVKDGGFYGW EECCCCCCEEEEECCCCCCCCEECCCCCEEEEEECCHHHCCCCCCHHHHHHCCCCCEECC PYSYWGNHVDPRVMPQRPDLVAAALMPDYALSSHVAPLGMTFSSGAGLPQAYRAGAFVGE CHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHHHCCCEEEC HGSWNREPLNGYKVVYIPFENGRPAGKAQDVVTGFLTDDGHARGRPVGLAMDGHGALLIA CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEE DDAGGAVWRVTASGSQTRAEPAPIVR ECCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7574579 [H]