| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is wcaL [C]
Identifier: 170746627
GI number: 170746627
Start: 176102
End: 177346
Strand: Reverse
Name: wcaL [C]
Synonym: Mrad2831_0178
Alternate gene names: 170746627
Gene position: 177346-176102 (Counterclockwise)
Preceding gene: 170746628
Following gene: 170746626
Centisome position: 2.92
GC content: 74.46
Gene sequence:
>1245_bases ATGCGCATCCTGCACCTTAGCTCGCTCTACGCGCCCGAGCAGGTCGGCGGCGCCGAACTGATGGTCGAGACTCTCGCCCG GACCCAGGCGGAGCTCGGCCACAACGTCGCCGTCGCCTGCGCGGCGCGGACCGAGGGCGGACCGGTCCTGCAGGACGGCG TCACCGTCTACCGGACCGGGTACGGAACGCCGTTCCACATCCTCGACTGGTCCCAGCGCGGGCGGGTCGACCGCCTCCGC TACAAGCTCGCGGCGCAGTGGAACCGCCACGCCCTCGACCGGATGATGCGGGCGGTCGGGGACTTCGCCCCCGACCTCGT CAACACCCACTCCATCTCCGAACTGCCGCCGGCGCTCTGGCCGCTGCTTCGGCGACTCGGGGTGCCGGTCGTGCACACGC TGCACGACTTCACCAGCCTCTGCACCAACGGCGCCATGGTGCGCCACGGGCGTTCCTGCGCCGGCCAGCATCTCAAGTGC CGCCTCTACGCGGCGCCGCACCGGCGCTGCCAGCGCGCCGTGACGGCCGTCACCGCCGTGGGCTCGGACATCCTCGATCG CCACCTCGCCGCCGGCCTCTTCGCCCACGTGCCGCCGTCGCTGCGCCGAGTGATCTGGAACCCGATCCGGCCCGGTTCAC CCGTGGCGCGGAGGCAGCGCGCGCCCGGCGCGCCGGTCCGGTTCGGCTATCTGGGCCGGATCGAGGGCGCGAAGGGCTTC GACGTGCTCCTCGAGGCCTGCCGACGCCTGCCGGAGGCGGGCTGGCGCCTCGCCGTCGCGGGCCGCGCCGTGGACGGGCT CGACCGTTACCGCGCCCTGGCCGAGGGCCTGCCCGTCAACTTTCTGGGCTACGTGGAGCGCGACGCCTTCCTCGACGGTC TCGACTGCCTCGTGGTCCCGCCAGTCTGGCCCGAGCCCTTCGGCCGGACGGTGGCGGAGGCCTACGGGCGCGGCGTCCCG GTGATCGGCACCGCCACCGGCGGCATCGGCGAGCAGGTCGGGCCGGGCCCCTGGCTGGTCCCGCCGGGCGACGCGTCGGC GCTCGCCGCCGCGATGACCCGGATCGTCGCGGAGCCGGCCCGCCTCGCCGAAGGTCTCGCTCGCGCCGCCCGGATCCGCG CCGACACCGATCCGGTCGCCGTCGCGACCGCCTTCCTCGACCTCTACGCCGCGACCCGCACCGAACCGCTTCCCGAGCTT TCCGCCCGCGCGGAGCGCCCGCATTTCAGCGAGTGCCGTCCATGA
Upstream 100 bases:
>100_bases CGGCGCTACGACTGGGCCGAGACCGCCCGCCGCTACGAGACACTGCTGCTCGACGCGCTGCGGGACGGCGTGACGGCGCG TACCGCCCGGGAGGTGCCGC
Downstream 100 bases:
>100_bases TGACCCCCACCCTGTCGTCGAACTACGCCCGGCTCCTGACCGAGGAGCCGCGCGCTCAGGGCCAGGACCGGCCGAGGGAT CAGGCCACCGCGCGCGCGGT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: ORF8 [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MRILHLSSLYAPEQVGGAELMVETLARTQAELGHNVAVACAARTEGGPVLQDGVTVYRTGYGTPFHILDWSQRGRVDRLR YKLAAQWNRHALDRMMRAVGDFAPDLVNTHSISELPPALWPLLRRLGVPVVHTLHDFTSLCTNGAMVRHGRSCAGQHLKC RLYAAPHRRCQRAVTAVTAVGSDILDRHLAAGLFAHVPPSLRRVIWNPIRPGSPVARRQRAPGAPVRFGYLGRIEGAKGF DVLLEACRRLPEAGWRLAVAGRAVDGLDRYRALAEGLPVNFLGYVERDAFLDGLDCLVVPPVWPEPFGRTVAEAYGRGVP VIGTATGGIGEQVGPGPWLVPPGDASALAAAMTRIVAEPARLAEGLARAARIRADTDPVAVATAFLDLYAATRTEPLPEL SARAERPHFSECRP
Sequences:
>Translated_414_residues MRILHLSSLYAPEQVGGAELMVETLARTQAELGHNVAVACAARTEGGPVLQDGVTVYRTGYGTPFHILDWSQRGRVDRLR YKLAAQWNRHALDRMMRAVGDFAPDLVNTHSISELPPALWPLLRRLGVPVVHTLHDFTSLCTNGAMVRHGRSCAGQHLKC RLYAAPHRRCQRAVTAVTAVGSDILDRHLAAGLFAHVPPSLRRVIWNPIRPGSPVARRQRAPGAPVRFGYLGRIEGAKGF DVLLEACRRLPEAGWRLAVAGRAVDGLDRYRALAEGLPVNFLGYVERDAFLDGLDCLVVPPVWPEPFGRTVAEAYGRGVP VIGTATGGIGEQVGPGPWLVPPGDASALAAAMTRIVAEPARLAEGLARAARIRADTDPVAVATAFLDLYAATRTEPLPEL SARAERPHFSECRP >Mature_414_residues MRILHLSSLYAPEQVGGAELMVETLARTQAELGHNVAVACAARTEGGPVLQDGVTVYRTGYGTPFHILDWSQRGRVDRLR YKLAAQWNRHALDRMMRAVGDFAPDLVNTHSISELPPALWPLLRRLGVPVVHTLHDFTSLCTNGAMVRHGRSCAGQHLKC RLYAAPHRRCQRAVTAVTAVGSDILDRHLAAGLFAHVPPSLRRVIWNPIRPGSPVARRQRAPGAPVRFGYLGRIEGAKGF DVLLEACRRLPEAGWRLAVAGRAVDGLDRYRALAEGLPVNFLGYVERDAFLDGLDCLVVPPVWPEPFGRTVAEAYGRGVP VIGTATGGIGEQVGPGPWLVPPGDASALAAAMTRIVAEPARLAEGLARAARIRADTDPVAVATAFLDLYAATRTEPLPEL SARAERPHFSECRP
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 44855; Mature: 44855
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILHLSSLYAPEQVGGAELMVETLARTQAELGHNVAVACAARTEGGPVLQDGVTVYRTG CEEEECHHHCCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEEEEEC YGTPFHILDWSQRGRVDRLRYKLAAQWNRHALDRMMRAVGDFAPDLVNTHSISELPPALW CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCHHHH PLLRRLGVPVVHTLHDFTSLCTNGAMVRHGRSCAGQHLKCRLYAAPHRRCQRAVTAVTAV HHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCHHCCCCEEEEEEECHHHHHHHHHHHHHHH GSDILDRHLAAGLFAHVPPSLRRVIWNPIRPGSPVARRQRAPGAPVRFGYLGRIEGAKGF HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHCCCCCCEEECEEEECCCCCCH DVLLEACRRLPEAGWRLAVAGRAVDGLDRYRALAEGLPVNFLGYVERDAFLDGLDCLVVP HHHHHHHHHCHHCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC PVWPEPFGRTVAEAYGRGVPVIGTATGGIGEQVGPGPWLVPPGDASALAAAMTRIVAEPA CCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RLAEGLARAARIRADTDPVAVATAFLDLYAATRTEPLPELSARAERPHFSECRP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRILHLSSLYAPEQVGGAELMVETLARTQAELGHNVAVACAARTEGGPVLQDGVTVYRTG CEEEECHHHCCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEEEEEC YGTPFHILDWSQRGRVDRLRYKLAAQWNRHALDRMMRAVGDFAPDLVNTHSISELPPALW CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCHHHH PLLRRLGVPVVHTLHDFTSLCTNGAMVRHGRSCAGQHLKCRLYAAPHRRCQRAVTAVTAV HHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCHHCCCCEEEEEEECHHHHHHHHHHHHHHH GSDILDRHLAAGLFAHVPPSLRRVIWNPIRPGSPVARRQRAPGAPVRFGYLGRIEGAKGF HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHCCCCCCEEECEEEECCCCCCH DVLLEACRRLPEAGWRLAVAGRAVDGLDRYRALAEGLPVNFLGYVERDAFLDGLDCLVVP HHHHHHHHHCHHCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC PVWPEPFGRTVAEAYGRGVPVIGTATGGIGEQVGPGPWLVPPGDASALAAAMTRIVAEPA CCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RLAEGLARAARIRADTDPVAVATAFLDLYAATRTEPLPELSARAERPHFSECRP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]