| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170746580
Identifier: 170746580
GI number: 170746580
Start: 132539
End: 133150
Strand: Reverse
Name: 170746580
Synonym: Mrad2831_0130
Alternate gene names: NA
Gene position: 133150-132539 (Counterclockwise)
Preceding gene: 170746581
Following gene: 170746579
Centisome position: 2.19
GC content: 74.67
Gene sequence:
>612_bases ATGACGCCGACCCGCCTCCTCGCCGCCCTGGTCTGCCTATCGGGCCTCGCCCTGGACATCCCGGCGGCGCGAGCGGCTCC GGAGACCGGGCGTCCCGGCCGCACCGCTCCCGAGGGGAAGCCGGCCCCCAAGCCGCCGAGCCTCGACGACCTGTTCGCCC GCCTGCGCGCCAGCGAGGACCCGGCCGAGGCCAAGGGCATCGCCCGGCTGATCGAGCGGCGCATGGCCGGGTCGGGCAGT CCGACCGCCGACCTCCTCACCGACCGCGCCCGGCAGGCGGTCACCGCACACGACTTCCCCCTGGCGGCCGAGCTGATGGA CCGCGTCACCGCCCTCGAGCCGAACTGGTCGGAGGGCTGGAACCGGCGCGCGACGGTGTTCTGGCTCCTGTCCGACAAGG ACGACGCCCTGGCGGACCTGCAGCGGGCCCTGGTGCTGGAGCCGCGCCACTTCGAGGCCTGGGCCGCGATGGGCCGGATC TACGAATCGCTCGACGACAAGGCGCGGGCGCTCGCCGCCTTCCGGCGGGCGCGGGCGCTCTACCCGCAGATGGAGAAGAT CGGCGAGGCGATCAACCGCCTCACTCCGGAGGTCGACGGCCGCGACCTGTGA
Upstream 100 bases:
>100_bases GACGTTGGGACGGCCGTACCCGAAGGGGCGCGGCCGTTTCCGCATGCGCGCGGCACCGCGGCACGTTGACGGATTTCGGG CCGGCGCACAGTCTGGCCGC
Downstream 100 bases:
>100_bases GCCGGGTGACCGCCGTCCTCCTCACCCTCCTGGCCCTGCCCTTCGCCCTCGCCGGGCTCGTCCTCGCGGCCGGCGCGCTA GCGACGCTGGCCATCACCCT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTPTRLLAALVCLSGLALDIPAARAAPETGRPGRTAPEGKPAPKPPSLDDLFARLRASEDPAEAKGIARLIERRMAGSGS PTADLLTDRARQAVTAHDFPLAAELMDRVTALEPNWSEGWNRRATVFWLLSDKDDALADLQRALVLEPRHFEAWAAMGRI YESLDDKARALAAFRRARALYPQMEKIGEAINRLTPEVDGRDL
Sequences:
>Translated_203_residues MTPTRLLAALVCLSGLALDIPAARAAPETGRPGRTAPEGKPAPKPPSLDDLFARLRASEDPAEAKGIARLIERRMAGSGS PTADLLTDRARQAVTAHDFPLAAELMDRVTALEPNWSEGWNRRATVFWLLSDKDDALADLQRALVLEPRHFEAWAAMGRI YESLDDKARALAAFRRARALYPQMEKIGEAINRLTPEVDGRDL >Mature_202_residues TPTRLLAALVCLSGLALDIPAARAAPETGRPGRTAPEGKPAPKPPSLDDLFARLRASEDPAEAKGIARLIERRMAGSGSP TADLLTDRARQAVTAHDFPLAAELMDRVTALEPNWSEGWNRRATVFWLLSDKDDALADLQRALVLEPRHFEAWAAMGRIY ESLDDKARALAAFRRARALYPQMEKIGEAINRLTPEVDGRDL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22260; Mature: 22128
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTRLLAALVCLSGLALDIPAARAAPETGRPGRTAPEGKPAPKPPSLDDLFARLRASED CCHHHHHHHHHHHHCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC PAEAKGIARLIERRMAGSGSPTADLLTDRARQAVTAHDFPLAAELMDRVTALEPNWSEGW CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCC NRRATVFWLLSDKDDALADLQRALVLEPRHFEAWAAMGRIYESLDDKARALAAFRRARAL CCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPQMEKIGEAINRLTPEVDGRDL HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TPTRLLAALVCLSGLALDIPAARAAPETGRPGRTAPEGKPAPKPPSLDDLFARLRASED CHHHHHHHHHHHHCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC PAEAKGIARLIERRMAGSGSPTADLLTDRARQAVTAHDFPLAAELMDRVTALEPNWSEGW CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCC NRRATVFWLLSDKDDALADLQRALVLEPRHFEAWAAMGRIYESLDDKARALAAFRRARAL CCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPQMEKIGEAINRLTPEVDGRDL HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA