| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yibQ [C]
Identifier: 170746547
GI number: 170746547
Start: 102627
End: 103862
Strand: Reverse
Name: yibQ [C]
Synonym: Mrad2831_0097
Alternate gene names: 170746547
Gene position: 103862-102627 (Counterclockwise)
Preceding gene: 170746548
Following gene: 170746546
Centisome position: 1.71
GC content: 75.49
Gene sequence:
>1236_bases TTGACCGAGTCCACCGACGATATCCTCACGCGCCCCCTCGGGGTGCCGGAGGCGGCGCCGGCGCAGCCCGAAGGCCGGAT CGGACGCCTCGTCGCGGCTGGCCGCCGGCCCCGGGTCGCGGCCGCCGCGCTCGCGGCCAGCTTCGTGGTGGCGGCCGGCC TGGTGCTCGCGCTGGGGGACCCGCACGGCGGTGAGCCCCGCGTCCAGGTGGCGATCACGATGCGCGAACCCGCGGCCCGC CCGGCCGCGCAGGCGCCAGCCGCACAGCAGCCCCAGGTGATCACGACGGAACCCGGAACCGCGCCGCTCCAGCGCAGTGC CGAGGAGGTCGAGACCGCCTCCGGCGTCACGGTCGTGCGCCCGGCCGGCAGCGGGCCGAGCGAGGCGGTGGTGATCCGTG TGCCGCCGCCGAGCGCCCCCCGTCTCGCCCAGGCCCCGGATCCGCGGATCAGCGAATCCGGCCGCCACGGTCTCATGCCG AAGCTGGGCGAGGGCCGCATCCGCGCCCTCGACGTGTACGCCCGATCGGAAGAGGCCGGCTCGGGGCCGCGCATCGCGAT CGTGGTGACCGGTCTCGGTGTCGGCCAGGCCGCCACCGCCGGCGCCACCGCGCGCCTGCCCGCCGCCGTGAGTCTCGCCT TCCTGCCCTACGGCGGCGAGGTCGAGCGCGCCGCCGCGCGCGCCAGGGACGCGGGCCACGAAGTGTTCCTGCAACTCCCG ATGGAGCCCTTCGACTATCCCGACAGCGACCCGGGCCCGCAGACGCTGCTCACCGCGTTGAAGGGGCTGGAGAATGCCGA TCGGCAGGCCTGGGCGATGGCGCGCTTCCCGGGCTATGTCGGCGTCGTGAACTACATGGGCTCGAAGCTCATGGCCGATG CGGCGTTCGAGCCGGTCCTGCGCGAGATCGGCGCCCGCGGTCTGGGGTTCCTCGACGACGGCACGGCTTCGAAGCCCGCG GTCGCGCCCGCCAACAAGGGGAAGACGCCGGTCGCCCGCGCCGAGATCGTCCTCGACGCCACGCCGCGCGCCGACGCGAT CGACGCCGCACTCGCCCAGGCCGAGGCTCGGGCCCGCGCCAACGGCTTCGCCCTGGTCTCGGCGACCGGGACACCGCTGA GCGTCGATCGGATCGCGCGCTGGGCGAAGGAGATCGAGTCCCGCGGGCTGCGCCTCGTGCCGGCGAGCGTGGCGCTGCGC GGCGCCCGCGACAAGCGAGTCTCCACGGCTGATTGA
Upstream 100 bases:
>100_bases CGAGCATTAGCGGAACGTTAACCATACCCGGCCGCAATGGATCCGAGGGTTGGGACCGCGCCGACCGGCGCAGGAACCGC GATCCCGTATCGAGAGCCGC
Downstream 100 bases:
>100_bases ACGCGACCGTGTCGAAAGTCAGCGCAAGTAGATCCGGCACCGTCCGGATCGGTGAAGACTTGGTCGACGTTGCCGCCTCG CCCACCCCTGACCTATGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTESTDDILTRPLGVPEAAPAQPEGRIGRLVAAGRRPRVAAAALAASFVVAAGLVLALGDPHGGEPRVQVAITMREPAAR PAAQAPAAQQPQVITTEPGTAPLQRSAEEVETASGVTVVRPAGSGPSEAVVIRVPPPSAPRLAQAPDPRISESGRHGLMP KLGEGRIRALDVYARSEEAGSGPRIAIVVTGLGVGQAATAGATARLPAAVSLAFLPYGGEVERAAARARDAGHEVFLQLP MEPFDYPDSDPGPQTLLTALKGLENADRQAWAMARFPGYVGVVNYMGSKLMADAAFEPVLREIGARGLGFLDDGTASKPA VAPANKGKTPVARAEIVLDATPRADAIDAALAQAEARARANGFALVSATGTPLSVDRIARWAKEIESRGLRLVPASVALR GARDKRVSTAD
Sequences:
>Translated_411_residues MTESTDDILTRPLGVPEAAPAQPEGRIGRLVAAGRRPRVAAAALAASFVVAAGLVLALGDPHGGEPRVQVAITMREPAAR PAAQAPAAQQPQVITTEPGTAPLQRSAEEVETASGVTVVRPAGSGPSEAVVIRVPPPSAPRLAQAPDPRISESGRHGLMP KLGEGRIRALDVYARSEEAGSGPRIAIVVTGLGVGQAATAGATARLPAAVSLAFLPYGGEVERAAARARDAGHEVFLQLP MEPFDYPDSDPGPQTLLTALKGLENADRQAWAMARFPGYVGVVNYMGSKLMADAAFEPVLREIGARGLGFLDDGTASKPA VAPANKGKTPVARAEIVLDATPRADAIDAALAQAEARARANGFALVSATGTPLSVDRIARWAKEIESRGLRLVPASVALR GARDKRVSTAD >Mature_410_residues TESTDDILTRPLGVPEAAPAQPEGRIGRLVAAGRRPRVAAAALAASFVVAAGLVLALGDPHGGEPRVQVAITMREPAARP AAQAPAAQQPQVITTEPGTAPLQRSAEEVETASGVTVVRPAGSGPSEAVVIRVPPPSAPRLAQAPDPRISESGRHGLMPK LGEGRIRALDVYARSEEAGSGPRIAIVVTGLGVGQAATAGATARLPAAVSLAFLPYGGEVERAAARARDAGHEVFLQLPM EPFDYPDSDPGPQTLLTALKGLENADRQAWAMARFPGYVGVVNYMGSKLMADAAFEPVLREIGARGLGFLDDGTASKPAV APANKGKTPVARAEIVLDATPRADAIDAALAQAEARARANGFALVSATGTPLSVDRIARWAKEIESRGLRLVPASVALRG ARDKRVSTAD
Specific function: Unknown
COG id: COG2861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42365; Mature: 42233
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESTDDILTRPLGVPEAAPAQPEGRIGRLVAAGRRPRVAAAALAASFVVAAGLVLALGD CCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEECC PHGGEPRVQVAITMREPAARPAAQAPAAQQPQVITTEPGTAPLQRSAEEVETASGVTVVR CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEE PAGSGPSEAVVIRVPPPSAPRLAQAPDPRISESGRHGLMPKLGEGRIRALDVYARSEEAG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC SGPRIAIVVTGLGVGQAATAGATARLPAAVSLAFLPYGGEVERAAARARDAGHEVFLQLP CCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEC MEPFDYPDSDPGPQTLLTALKGLENADRQAWAMARFPGYVGVVNYMGSKLMADAAFEPVL CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH REIGARGLGFLDDGTASKPAVAPANKGKTPVARAEIVLDATPRADAIDAALAQAEARARA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC NGFALVSATGTPLSVDRIARWAKEIESRGLRLVPASVALRGARDKRVSTAD CCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCC >Mature Secondary Structure TESTDDILTRPLGVPEAAPAQPEGRIGRLVAAGRRPRVAAAALAASFVVAAGLVLALGD CCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEECC PHGGEPRVQVAITMREPAARPAAQAPAAQQPQVITTEPGTAPLQRSAEEVETASGVTVVR CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEE PAGSGPSEAVVIRVPPPSAPRLAQAPDPRISESGRHGLMPKLGEGRIRALDVYARSEEAG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC SGPRIAIVVTGLGVGQAATAGATARLPAAVSLAFLPYGGEVERAAARARDAGHEVFLQLP CCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEC MEPFDYPDSDPGPQTLLTALKGLENADRQAWAMARFPGYVGVVNYMGSKLMADAAFEPVL CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH REIGARGLGFLDDGTASKPAVAPANKGKTPVARAEIVLDATPRADAIDAALAQAEARARA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC NGFALVSATGTPLSVDRIARWAKEIESRGLRLVPASVALRGARDKRVSTAD CCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA