Click here to switch to the map view.

The map label for this gene is 170746521

Identifier: 170746521

GI number: 170746521

Start: 74243

End: 74434

Strand: Reverse

Name: 170746521

Synonym: Mrad2831_0071

Alternate gene names: NA

Gene position: 74434-74243 (Counterclockwise)

Preceding gene: 170746524

Following gene: 170746520

Centisome position: 1.22

GC content: 67.19

Gene sequence:

>192_bases
ATGAGCAGCACCACCGACAAGATCAAGGGCGTCGCCAACGAGGCCCTCGGCAAGGCCAAGCAGGGCATCGGCGACGTGAC
CGGCAACGACAAGCTCAAGGCCGAGGGCGCCGCTCAGGAGCTCAAGGGCAAGGCCCAGGGCACGGTCGGCGACGCCAAGA
GCGCGGTGAAGTCCGCCACCGACAAGCTCTGA

Upstream 100 bases:

>100_bases
CCTGATCCAGGTCAATGTTAAGGCCTGGAACATTCCGCCGACCGTGACCGTTTCAGGAACCAGTGCGGCGTCGCCGCAGA
TCGAGCAAGAGGACAACGCC

Downstream 100 bases:

>100_bases
TCGTCGAGCGCGACCGGAACGGAACCCGCCGCGCGCGGGTTCCACAACTGAACCGACCCGAATAACGCGAGGATGCCATG
ATCGGTTGGGCTGTCACGTT

Product: CsbD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSSTTDKIKGVANEALGKAKQGIGDVTGNDKLKAEGAAQELKGKAQGTVGDAKSAVKSATDKL

Sequences:

>Translated_63_residues
MSSTTDKIKGVANEALGKAKQGIGDVTGNDKLKAEGAAQELKGKAQGTVGDAKSAVKSATDKL
>Mature_62_residues
SSTTDKIKGVANEALGKAKQGIGDVTGNDKLKAEGAAQELKGKAQGTVGDAKSAVKSATDKL

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 6288; Mature: 6157

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTTDKIKGVANEALGKAKQGIGDVTGNDKLKAEGAAQELKGKAQGTVGDAKSAVKSAT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHH
DKL
CCC
>Mature Secondary Structure 
SSTTDKIKGVANEALGKAKQGIGDVTGNDKLKAEGAAQELKGKAQGTVGDAKSAVKSAT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHH
DKL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]