Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 170726958

GI number:

Start: 3193723

End: 3195276

Strand: Direct

Name: Not Available

Synonym: Swoo_2612

Alternate gene names: NA

Gene position: NA

Preceding gene: 170726957

Following gene: 170726962

Centisome position: NA

GC content: NA

Gene sequence:

>1554_bases
ATGCGCATACAAGTATTTGTAATAGCGGGGGGAATTGCCCTGCTATCTGGTTGTCAGTCTTTCAATCAAACGACAAGAGA
CACCACAGAACAAGCTCAGCCACTGGTTCAACAAGCTGCATTATTGCCCCCAGCTATCGAAAAAGCACCGATTGAGGAGG
CCATCGAGATCAGCGATGTTTGGCAACGGATACGTTTAGGACTAAGCCTTCCTGTTCCCGATCAAAAGCTGGTTAATCAA
TATCGCGATTGGTATATCAAACACCCACAGCACCTAGAGCGGGTATCACAAAGAGCCGAGCCCTTTCTTTATCTCATTGT
TGAAGAGATAGAGAAACGGGATCTACCCATTGAGTTAGCCTTACTTCCAATTGTCGAGAGCGCCTTTGACCCCTTTGCAT
ACTCCCATGGTGCAGCTTCGGGTTTATGGCAATTTACCGCCCCTATGGCCAAACATTTCGGACTAGAGATGAACTGGTGG
TATGACGGACGCCGTGATGTGCCCGCTGCCACCATTGCAGCTTTGGATATGCTCGAATACCTCTATAAAAAAACACACGG
TAATTGGCTCTACGCAACCGCTGCCTATAACACAGGAGAGGGCCGCGTTCTCAATGCCGTCAAGCGCAATAAAAGACAGG
GTAAAGCCACTGACTTCTGGTCTTTGGACCTGCCAAGAGAGACGGAGCGTTATGTACCTCAAATGTTGGCTTTGGCAGAG
GTCATAAAAAATGCAGATAAATATGGCATTAAACTTATGCCAATTAAAAACCAACCTCAGATCCAAGTTGTGGATATTGG
TGGTCAGATAGATCTCGCATTAGCTGCAGGGATGGCCGGTATGACCACCTCTGAACTGCATAAGCTTAACCCTGGCTATA
ATCAATGGGCAACAGCCCCTGATGGACCACATAAGCTTGTGCTTCCAGTCGATAAAGCAAAAGAGTTTAACCTTGCATTG
GCTGAAACAAATCCAGATGAGCGATTAAACTGGGAAAGGTATCAAATAAAATCCGGTGACAGTTTAGGCGTGATAGCGAA
AAGATACCACACTACAGTCCCAGCTCTACGAGCGGTTAATGATATAAAGGGCAATACTATTGTTATAGGTAAGCATCTGC
TGATCCCTGTAGCCGCTAAATCACCTGAGCAGTACGCTTATTCGGCAAACCAAAGGTTACTGGCTAAGCAAAAAGGAAAA
TCTGGCAATAAAGTTAGCTATACCGTCCAAGCAGGTGATTCATTTTGGAAAATAGCCAAGGCACATAAAGTGTCAGTATC
TCAGCTGACAAGCTGGAACAATATGGCTCCAAAAGATGGATTGAGAATTGGTAAAAAACTGACTATCTGGACTGGTGGAA
AACAGAAAACCTCCTCAATCACCCGCACTGTTAACTACACAGTAAGAAACGGTGATTCCTTAGCTCGTATTGCGACTAAG
TTTAAGGTGAGTGTGAACGATCTTGTTCGTTGGAATGCACTAGAAAAAAGCAAATATATCCAGCCAGGTCAGAAACTCAA
ACTCTTTGTCGATATGAGTAAAGTTCGAGCCTAA

Upstream 100 bases:

>100_bases
ACAAGGCTTAAGAAATAAATTACAATAATGCGCTAATAAGTCCCCTTTTTCAGCTATACACCAAAAAGTAGAGGGACTAC
ATTGAGGAATTAATTGTTAA

Downstream 100 bases:

>100_bases
TACCTATTTTAGAACGAAAAAAAGCCAGTGGATGTCAATGACAAACACTGGCTTTTTTATGCCGATAACTTAATTCAAAA
TGTCGTTAAGTGACAAGCTA

Product: lytic transglycosylase catalytic

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>517_residues
MRIQVFVIAGGIALLSGCQSFNQTTRDTTEQAQPLVQQAALLPPAIEKAPIEEAIEISDVWQRIRLGLSLPVPDQKLVNQ
YRDWYIKHPQHLERVSQRAEPFLYLIVEEIEKRDLPIELALLPIVESAFDPFAYSHGAASGLWQFTAPMAKHFGLEMNWW
YDGRRDVPAATIAALDMLEYLYKKTHGNWLYATAAYNTGEGRVLNAVKRNKRQGKATDFWSLDLPRETERYVPQMLALAE
VIKNADKYGIKLMPIKNQPQIQVVDIGGQIDLALAAGMAGMTTSELHKLNPGYNQWATAPDGPHKLVLPVDKAKEFNLAL
AETNPDERLNWERYQIKSGDSLGVIAKRYHTTVPALRAVNDIKGNTIVIGKHLLIPVAAKSPEQYAYSANQRLLAKQKGK
SGNKVSYTVQAGDSFWKIAKAHKVSVSQLTSWNNMAPKDGLRIGKKLTIWTGGKQKTSSITRTVNYTVRNGDSLARIATK
FKVSVNDLVRWNALEKSKYIQPGQKLKLFVDMSKVRA

Sequences:
NA

Specific function: NA

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA