| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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Identifier: 170725782
GI number:
Start: 1784247
End: 1790102
Strand: Reverse
Name: Not Available
Synonym: Swoo_1421
Alternate gene names: NA
Gene position: NA
Preceding gene: 170725783
Following gene: 170725781
Centisome position: NA
GC content: NA
Gene sequence:
>5856_bases ATGTCTTCTTCAAACTCAAACAGCACTAAACAGAGCAAGATTGCCATTGTCGGCCTTGCCACACTCTACCCGGATGCTAA GACACCAGGTGAGTTTTGGCAAAACCTGCTAGATAAACGAGACTCACGAACCACCTTAACCAATAAAAAGCTCGGGGCTA ACAGCTGCGACTACCAAGGTGTTCAGGGACAATCTGACCGTTTTTATTGTGATAAAGGCGGCTACATCGAAAACTTCCAC TTCGATGCAACAGGCTATCAACTTCCAAGTGAAAGCTTAACAGGGTTAGATGACAGCTTTCTTTGGGCGCTTGATACCAG CCGAAAAGCACTCCAGGATGCGGGCATTAACTTAGGTAGCGCTTCGTTAGCGCGCACAGGTATCATCATGGGAGCGCTGT CGTTTCCTACGACTCGCTCGAACGATCTGTTTCTGCCTATCTATCACAGCGCCGTTGAGAAGGCGTTGCAAGATAAGCTC GGAGCAAGTGCTTTTAAGCTAAACCCAACCAATGCCCACACGAGCCGAGCACAAGGTGAGGCCACCTTAGATAACGCTAA CGGCGCCATCGCCCACAACGCTTCAAAAGTGGTGGCAGACGCGCTAGGTTTAGGCGGCGCACAGCTCAGTCTCGATGCAG CTTGTGCAAGCTCAGTCTACTCACTGAAACTTGCTTGTGACTACTTAAGTGCAGGCAAAGCCGATGTGATGCTAGCAGGC GCAGTCTCAGGGGCTGATCCCTTCTTTATTAACATGGGTTTCTCCATCTTTCACGCCTACCCAGATCACGGTATCTCTGT CCCCTTTGATGGTAACAGCAAAGGGCTATTTGCTGGCGAAGGTGCTGGCGTACTCGTGCTAAAGCGTTTAGATGATGCCG AGCGTGATGATGATAATATCTATGCGGTCGTGAGTGGTGTTGGCTTATCTAACGATGGTAAGGGGCAGTTTGTACTAAGC CCTAACCCTAAAGGGCAGGTTAAAGCGTTTGAGCGAGCCTATGCCGCCAGCGACATTGAGCCTAAAGATATCGAGGTCAT TGAGTGTCACGCAACGGGGACTCCACTGGGTGATAAAATAGAGCTTACCTCAATGGAGACCTTCTTTGAAGGTAAGCTCG CTGGCAATCAGGCGCCGCTGATAGGCTCAGCTAAATCGAACTTAGGCCACCTGTTAACCGCTGCGGGCATGCCGGGGATC ATGAAGATGATTTTCGCCATGAAAGAGGGTGCACTGCCGCCAAGTATCAATATTAGCGATGCGATATCCTCGCCTAATCA TCTGTTTGGCTCATCAACCTTGCCAAATCAAGTACAACCTTGGCCAGCTAAAACAGGCAATGCTCAACGTCACGCTGGCG TTTCTGTATTTGGTTTCGGAGGCTGTAACGCTCACCTGTTATTAGAGAGCTATTTACCTCCAAAAGACGCAGCTGGCGCT CAAGCTACAGGCGCAGTCAAGCAGACTCAGCCAACCGTGACACCACAGCCGATGAAGATCACAGGTCTTGCATCTCACTT TGGTCCCCTAAACAGTATTAATCAGCTTAACAGTGCGATTACCTCAAACAGCAATGGCTTTATCACCTTGCCGAAAAAGC GCTGGAAAGGGCTAGAGCAACACTCAGAGCTATTAGCTGAATTTGGTTTAAGCGCGGCTCCCAAAGGAGCCTATGTCGAC AGTTTTGAGCTTGATTTCCTACGCTTTAAACTGCCACCAAATGAAGATGACCGTCTCATCTCACAGCAGCTCATGCTGAT GAAGGTCACCGATGAAGCGATACGAGATGCCAAACTAGAGCCGGGCCAGAAAGTGGCAGTGTTAGTTGCCATGGAAACCG AGCTTGAACTGCATCAATTCCGCGGCCGCGTTAACCTGCATACTCAACTTAAAGAGAGCCTAGCCGCTGTTGGCGTCACC TTGGATGAAGATGAGTATCAAGCATTAGAAGCTATCACCATGGATAGCGTGCTCGATGCGGCGAAGCTCAACCAGTACAC CAGCTTTATCGGCAATATCATGGCTTCGCGAATCGCATCTTTGTGGGACTTCCATGGCCCGGCATTTACCATCTCAGCCG CAGAGCAATCGGTAAGTCGCTGTATCGATGTCGCGCAAAATATGATGGTAAGTGAAGCTTTAGATGCCGTTGTTATTGCA GCAGTGGACCTCTCTGGTAGCTTTGAGCAGGTGATACTGAAAAACAGTGTTGAACCTGTCTCTATCGACGCAACTGCGGC CCAACACTCTACCGCTCAAGAAAGTGGAAGCTGGAATGTTGGTGAAGGTGCAGGTGCAATCGTGCTTGTAGCTAATGATG CTAAACCAGAAAAATCATACGGCACTATCAATTCGCTAGCCTTTGGCAACGCCACACAAGCCAATCTGGTTACCGATAAC TTGCTGACTCAAGCTGGCGCAGATATCAACACAGTCAAAGTCGTTGAAACCAGTATTGCACCAGGTAGTCATCGAAATAC CCCTGTTACAGATCTGTTCCCTAACGCCATTATCACAAGTGCAGATGAGCGTGTGGGTCATAGCTTTGCCGCAGCAGGAA TGGCGAGTCTACTTCATGGCCTGCTTAACCTCTCTACTCAGAATCAGTCCCAGAAGCAGCAAGCTGGTAGCCTTTTGGTC GCCAATAGCAGTGAAGCTCAAATATCGCAGCTGTTAATCAGCCAAACGGCAAGTGAAAACAGTGCCCTTACTAATCGATT AAGTCATGAACTTAAATCGGATGCTAAGCACCAGCTATTGAAGCAGGTCACTTTAGGGGGCCGAGATATCTATCAACATA TCCTACAGGCTCCACTAGCAAGCTTAGCCTCGATACAAGATAAGTTAGCCATGAGCAGTACTTCATCTGTGGTGAAATAC AAAAAGCCTTTGGTTACACGCACAGCATTACAGCAAGTTACTGAGCCTACGCAGGAAAAAGCCGCCTCAGTGAACCCTAC TCCAGTATTAGGTAACCCTATGACGTCTCAAGCTAAAACAATAACAGCACAAGCGCCAAGCAAAACTCTCGATGTTTCTG CGGGTGACTTAAGCGCTTTTCAGCAAAACCAGCAGCTGACCCAACAAGCTCACCAAGCATTTTTAAAGAGTCGCTCAGCC GGCATGAAAGTGGCTGATGCGCTGTTAAAGCAGCAACTTGCTCAAGTCACTGGACAAGAGCAGGTAGCTAGCACAGCAAT ACCGGCACCAGTTTCATACGCCAATACACTCGCTAAAAAATCGCCTGTGGCTGCTCACTCTTTACCTCAAGAGAGTGAAC TCAAACCTGATCACGCTAACGTGCCGCCATACACTGCGCCGACGCCTGAGCTTAAGCCCTGTATCTGGAATTATGCCGAT CTCGTTGAATACGCTGAAGGTGATATCGCCAATGTATTTGGCTCAGATTACGCCATCATCGACAGCTACTCACGCCGGGT ACGTCTACCGACCACAGATTACCTACTGGTGTCTCGCGTCACTAAGTTAGATGCGACCATGAACGAATTTAAAAAATGCT CAATGACCACTGAGTATGACATCCCTCTGGATGCTCCTTACTTGGTTGATGGCCAGATCCCGTGGGCTGTTGCGGTTGAA TCGGGTCAGTGTGACTTGATGCTCATCAGCTATCTAGGTATCGATTTTGAGAACAAGGGCGAGCGCGTTTACCGCCTATT AGATTGTACCCTCACCTTCCTAGGCGATCTGCCACGTGGCGGCGATACACTGCGTTATGATATTAAGATCAACAACTACG CCCGCAACGGCGACACCTTGCTGTTCTTCTTCTCATATGAGTGTTTTGTTGGCGATACCATGATCCTTAAGATGGATGGT GGCTGTGCTGGCTTCTTCACCGATGAGGAGCTTGCCGACGGTAAAGGTGTTATCCGCACCGAAGATGAGATTAAAGCCCG CAGCTTAGCGGTGAAGAAGACCTTTAACCCGATTTTAGATTGCCCTAAAACTAGCTTTAGCTATGGTGACATCCATAAAC TGCTAACGGCTGATATCGAAGGCTGTTTCGGTGCAAGTCATGCAGGCCCAGCCCAACCATCACTGTGTTTCGCATCAGAA AAGTTCCTGATGATTGAGCAGGTCAGCAAGGTTGAGCGTAATGGCGGCACATGGGGACTTGGACTAATCGAAGGTCATAA GCAGTTAGAACCAGATCACTGGTACTTCCCATGTCATTTCCAGGGCGACCAAGTGATGGCTGGCTCATTAATGGCTGAAG GCTGTGGCCAGTTGTTGCAGTTCTTTATGTTGCATTTAGGCATGCACACTCAAACCAAAAATGGACGCTTCCAGCCACTT GAAAATGCATCACAGCAGGTCCGTTGTCGCGGACAGGTACTGCCGCAATCAGGCACGCTAACCTACCGTATGGAAGTGAC GGAAATAGGCTTTAGCCCACGTCCATACGCTAAGGCAAATATCGATATCATCCTAAATGGCAAGCCAGTAGTGGACTTCC AAAACTTAGGTGTGATGATAAAAGAGGAAGATGAGTGTACTCGCTATCCGCTAGCGTCTCTTAATAAAGAGTCGGCTCAC GCAGCGAGCTCTTCTCCTAAAGCTTACCAGCCAGCATCAGCGAACGCGCCATTAATGGCCCAAATTCCAGATCTGACTAA AGCGCCAAACAAGGGCGTGATCCCGATTTCACACGTTGAAGCGCCAATCACACCGGATTACCCGAACCGTGTACCCGATA CCGTGCCATTTACGCCGTATCACATGTTTGAGTTTGCTACAGGTAACATCGAAAACTGTTTCGGACCTGAGTTCTCAATC TACCGCGGCATGATCCCACCACGTACTCCCTGTGGCGATCTGCAGGTCACCACACGCGTTATCGAAGTCAACGGCAAGCG CGGCGACTTTAAGAAGCCATCTTCATGTATCGCTGAATATGAAGTGCCAACCGATGCCTGGTACTTTGATAAAAATAGTC ACCATGCTGTGATGCCCTACTCTATTTTGATGGAGATATCCCTGCAACCAAACGGTTTCATCTCAGGTTACATGGGGACC ACACTTGGCTTCCCAGGTCTTGAGCTGTTCTTCCGTAATTTAGACGGTAGCGGTGAGCTACTACGCGAAGTCGATCTGCG TGGTAAAACTATCAAGAATGACTCACGTCTACTGTCAACCGTTATGGCTGGCACCAACATTATCCAAAGCTTTAGCTTCG AGCTAAGCACAGATGGTGAGCCATTCTATCGAGGCACTGCAGTATTTGGTTACTTCAAAGGTGATGCGCTTAAAGATCAA CTTGGCCTTGATAACGGTAAAGTGACACAACCTTGGCACGTCGCTAAAGGAATTGCAGCAGACACTAAAGTTAACCTACT CGATAAGAGTGGTCGTCATTTCACAGCCCCAGCGGGTAAACCACACTACCGTCTTGCAGGTGGTCAACTGAACTTTATCG ACTCGGTTGAGATTGTCGATAATGGCGGCACTGAAGGATTAGGCTACCTGTACGCTGAGCGCACTATCGACCCTAGTGAC TGGTTCTTCCAGTTCCACTTCCACCAAGATCCGGTAATGCCAGGCTCTTTAGGTGTTGAAGCAATTATCGAAACCATGCA AGCTTACGCCATCAGTAAAGACTTGGGCGCTGGATTTAACAATCCAAAGTTTGGTCAAATATTATCGAACATCAAGTGGA AGTATCGCGGTCAGATCAACCCACTGAATAAGCAGATGTCGATGGATGTCAGCATCACCTCGGTCAAAGATGAAAATGGC AAGAAGGTGATCACAGGTAATGCGAGTCTAAGTAAAGATGGGCTGCGTATTTACGAAGTTTTTGATATCGCAATCTCCAT CGAAGAAGCTCTTTAA
Upstream 100 bases:
>100_bases GATTAAATCGTGAGATAGCCCTGTCACAACTACAGGCTACACACACGGTTCAGCTCAAGAGTAAACAGATGTCGAATCTA ACTTTACAAGGAGAAGTCTA
Downstream 100 bases:
>100_bases TGGCTGATTAACTTGCTATTGTCGCCACGCTTCGTTGTCGAAGGTGCTCACCTATAGTCATAGGCTGCGCGCCTTCTCCT AGAATCAAGACGAACTAGCA
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1951_residues MSSSNSNSTKQSKIAIVGLATLYPDAKTPGEFWQNLLDKRDSRTTLTNKKLGANSCDYQGVQGQSDRFYCDKGGYIENFH FDATGYQLPSESLTGLDDSFLWALDTSRKALQDAGINLGSASLARTGIIMGALSFPTTRSNDLFLPIYHSAVEKALQDKL GASAFKLNPTNAHTSRAQGEATLDNANGAIAHNASKVVADALGLGGAQLSLDAACASSVYSLKLACDYLSAGKADVMLAG AVSGADPFFINMGFSIFHAYPDHGISVPFDGNSKGLFAGEGAGVLVLKRLDDAERDDDNIYAVVSGVGLSNDGKGQFVLS PNPKGQVKAFERAYAASDIEPKDIEVIECHATGTPLGDKIELTSMETFFEGKLAGNQAPLIGSAKSNLGHLLTAAGMPGI MKMIFAMKEGALPPSINISDAISSPNHLFGSSTLPNQVQPWPAKTGNAQRHAGVSVFGFGGCNAHLLLESYLPPKDAAGA QATGAVKQTQPTVTPQPMKITGLASHFGPLNSINQLNSAITSNSNGFITLPKKRWKGLEQHSELLAEFGLSAAPKGAYVD SFELDFLRFKLPPNEDDRLISQQLMLMKVTDEAIRDAKLEPGQKVAVLVAMETELELHQFRGRVNLHTQLKESLAAVGVT LDEDEYQALEAITMDSVLDAAKLNQYTSFIGNIMASRIASLWDFHGPAFTISAAEQSVSRCIDVAQNMMVSEALDAVVIA AVDLSGSFEQVILKNSVEPVSIDATAAQHSTAQESGSWNVGEGAGAIVLVANDAKPEKSYGTINSLAFGNATQANLVTDN LLTQAGADINTVKVVETSIAPGSHRNTPVTDLFPNAIITSADERVGHSFAAAGMASLLHGLLNLSTQNQSQKQQAGSLLV ANSSEAQISQLLISQTASENSALTNRLSHELKSDAKHQLLKQVTLGGRDIYQHILQAPLASLASIQDKLAMSSTSSVVKY KKPLVTRTALQQVTEPTQEKAASVNPTPVLGNPMTSQAKTITAQAPSKTLDVSAGDLSAFQQNQQLTQQAHQAFLKSRSA GMKVADALLKQQLAQVTGQEQVASTAIPAPVSYANTLAKKSPVAAHSLPQESELKPDHANVPPYTAPTPELKPCIWNYAD LVEYAEGDIANVFGSDYAIIDSYSRRVRLPTTDYLLVSRVTKLDATMNEFKKCSMTTEYDIPLDAPYLVDGQIPWAVAVE SGQCDLMLISYLGIDFENKGERVYRLLDCTLTFLGDLPRGGDTLRYDIKINNYARNGDTLLFFFSYECFVGDTMILKMDG GCAGFFTDEELADGKGVIRTEDEIKARSLAVKKTFNPILDCPKTSFSYGDIHKLLTADIEGCFGASHAGPAQPSLCFASE KFLMIEQVSKVERNGGTWGLGLIEGHKQLEPDHWYFPCHFQGDQVMAGSLMAEGCGQLLQFFMLHLGMHTQTKNGRFQPL ENASQQVRCRGQVLPQSGTLTYRMEVTEIGFSPRPYAKANIDIILNGKPVVDFQNLGVMIKEEDECTRYPLASLNKESAH AASSSPKAYQPASANAPLMAQIPDLTKAPNKGVIPISHVEAPITPDYPNRVPDTVPFTPYHMFEFATGNIENCFGPEFSI YRGMIPPRTPCGDLQVTTRVIEVNGKRGDFKKPSSCIAEYEVPTDAWYFDKNSHHAVMPYSILMEISLQPNGFISGYMGT TLGFPGLELFFRNLDGSGELLREVDLRGKTIKNDSRLLSTVMAGTNIIQSFSFELSTDGEPFYRGTAVFGYFKGDALKDQ LGLDNGKVTQPWHVAKGIAADTKVNLLDKSGRHFTAPAGKPHYRLAGGQLNFIDSVEIVDNGGTEGLGYLYAERTIDPSD WFFQFHFHQDPVMPGSLGVEAIIETMQAYAISKDLGAGFNNPKFGQILSNIKWKYRGQINPLNKQMSMDVSITSVKDENG KKVITGNASLSKDGLRIYEVFDIAISIEEAL
Sequences:
NA
Specific function: NA
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA