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The map label for this gene is pspC

Identifier: 170684285

GI number: 170684285

Start: 1836465

End: 1836824

Strand: Reverse

Name: pspC

Synonym: EcSMS35_1816

Alternate gene names: 170684285

Gene position: 1836824-1836465 (Counterclockwise)

Preceding gene: 170682840

Following gene: 170683517

Centisome position: 36.24

GC content: 49.72

Gene sequence:

>360_bases
ATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCACAGCAGGGCATGGTCCGTGGCGTCTGCGCCGGGATTGC
CAACTATTTTGATGTACCAGTAAAACTGGTGCGTATCCTGGTGGTGCTGTCGATTTTCTTCGGTCTGGCGCTGTTTACCC
TGGTTGCTTACATCATTTTGTCATTTGCGCTTGATCCAATGCCGGACAACATGGCCTTTGGTGAGCAGCTACCTTCCAGC
AGCGAATTGCTGGATGAAGTCGACCGTGAACTGGCGGCAAGTGAAACGCGTTTACGCGAGATGGAACGTTATGTCACTTC
CGATACTTTCACGTTACGTAGCCGTTTCCGTCAACTGTGA

Upstream 100 bases:

>100_bases
GATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGCTGGAATCCATTCTTGATGCAGAACAT
CCGAACTGGAGGGATCGCTA

Downstream 100 bases:

>100_bases
GGAAAGTTATGAATACTCGCTGGCAACAGGCCGGGCAAAAGGTGAAGCCTGGGTTCAAATTAGCAGGCAAGCTGGTACTT
CTTACCGCACTGCGCTATGG

Product: DNA-binding transcriptional activator PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSS
SELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL

Sequences:

>Translated_119_residues
MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSS
SELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL
>Mature_118_residues
AGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSS
ELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family

Homologues:

Organism=Escherichia coli, GI1787564, Length=119, Percent_Identity=100, Blast_Score=242, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSPC_ECO57 (P0AFN4)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C90864
- PIR:   F85754
- RefSeq:   NP_287882.1
- RefSeq:   NP_309910.1
- EnsemblBacteria:   EBESCT00000027170
- EnsemblBacteria:   EBESCT00000056849
- GeneID:   912672
- GeneID:   961328
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2479
- KEGG:   ecs:ECs1883
- GeneTree:   EBGT00050000009295
- HOGENOM:   HBG474354
- OMA:   FETWLVR
- ProtClustDB:   PRK10697
- BioCyc:   ECOL83334:ECS1883-MONOMER
- GO:   GO:0006350
- InterPro:   IPR007168
- InterPro:   IPR014320
- TIGRFAMs:   TIGR02978

Pfam domain/function: PF04024 PspC

EC number: NA

Molecular weight: Translated: 13517; Mature: 13386

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x40af26cc)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIIL
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL
HHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
AGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIIL
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL
HHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796