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The map label for this gene is ycfL [H]

Identifier: 170682863

GI number: 170682863

Start: 2043903

End: 2044256

Strand: Reverse

Name: ycfL [H]

Synonym: EcSMS35_2022

Alternate gene names: 170682863

Gene position: 2044256-2043903 (Counterclockwise)

Preceding gene: 170681005

Following gene: 170682321

Centisome position: 40.33

GC content: 50.0

Gene sequence:

>354_bases
GTGTCTCTGGCGTTGTTAGTGCTGTTGGGCTGTCGTTCACATCCGGAAATTCCGGTGAATGATGAGCAATCGCTGGTGAT
GGAGTCATCTTTATTGGCTGCGGGCATCAGTGCAGAAAAGCCCGTCCTTTCGACATCTGATATTCAACCTTCAGCATCCT
CAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGTTCATTATCGTTTTTACTGGTATGACGCCAGAGGGCTGGAGATG
CATCCTCTGGAAAGGCCACGCAGCGTTACCATTCCCGCACATTCGGCGGTCACGCTGTACGGCAGCGCCAATTTTCTGGG
GGCGCACAAAGTCAGACTTTATCTATATTTGTAA

Upstream 100 bases:

>100_bases
AGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTTGGACCAATGCTGGCGCATAAAGGTCTGTAACGATGA
GAAAAGGATGCTTTGGGCTG

Downstream 100 bases:

>100_bases
GGGGTGAATCTTGATGACAAAAATGAGTCGCTACGCCTTGATTACCGCGCTGGCGATGTTTCTCGCCGGGTGTGTGGGGC
AACGTGAACCTGCGCCGGTA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSLALLVLLGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEM
HPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL

Sequences:

>Translated_117_residues
MSLALLVLLGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEM
HPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
>Mature_116_residues
SLALLVLLGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMH
PLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL

Specific function: Unknown

COG id: COG5633

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787347, Length=108, Percent_Identity=99.0740740740741, Blast_Score=222, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010824 [H]

Pfam domain/function: PF07233 DUF1425 [H]

EC number: NA

Molecular weight: Translated: 13044; Mature: 12913

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLALLVLLGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTLYNER
CCEEEEEEECCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
QEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
CCCEEEEEEEEEEECCCCEECCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEEEEC
>Mature Secondary Structure 
SLALLVLLGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSASSTLYNER
CEEEEEEECCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
QEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
CCCEEEEEEEEEEECCCCEECCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]