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The map label for this gene is ydiQ [H]

Identifier: 170682544

GI number: 170682544

Start: 1482479

End: 1483243

Strand: Reverse

Name: ydiQ [H]

Synonym: EcSMS35_1498

Alternate gene names: 170682544

Gene position: 1483243-1482479 (Counterclockwise)

Preceding gene: 170684026

Following gene: 170682887

Centisome position: 29.26

GC content: 51.11

Gene sequence:

>765_bases
ATGAAAATAATAACCTGCTTTAAGCTGGTGCCTGAAGAACAGGACATTGTTGTCACTCCAGAATATACCCTGAATTTCGA
CAATGCCGACGCCAAAATCAGCCAGTTCGATCTCAATGCCATTGAAGCTGCAAGCCAGCTTGCATCAGATGACGATGAGA
TAGCCGCGCTGACCATTGGCGGCTCATTGTTGCAGAACTCGAAAGTGCGAAAAGACGTGCTATCCCGCGGGCCGCATAGC
CTGTATTTGGTGCAGGATGCGCAACTTGAACATGCACTGCCTCTCGATACCGCAAAGGCGCTGGCGGCAGCAGTTGAAAA
GATCGGCTTCGATTTACTGATCTTTGGTGAAGGTTCCGGCGACCTTTATGCCCAGCAGGTTGGCTTGCTGGTCGGAGAAA
TTCTGCAACTTCCGGTGATTAATGCAGTGAGTGCTATTCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAA
GATGATGTTGAAGTTATTGAGCTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACATGCCACGCATTCCTTC
GATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGACATTGGCTGGAGCCAGAGCGCAC
CACTTGCTGAACTGACCGGTATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTCTCGATAACGATTCGCCGGAG
GCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGA

Upstream 100 bases:

>100_bases
CTTGCTCCGTCGAAAACCCCGCACCGCTATCGCACACTATTTTCAGGCCATATTTACCTTCCATCGGAGATGGTTCCGTA
TGCGACTCACAGGAGAAATC

Downstream 100 bases:

>100_bases
AGTCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGT
TTGGCGGCGCTCAGCAATGG

Product: putative electron transfer flavoprotein YdiQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLASDDDEIAALTIGGSLLQNSKVRKDVLSRGPHS
LYLVQDAQLEHALPLDTAKALAAAVEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLE
DDVEVIELSVPAVLCVTSDINMPRIPSMKAILGAGKKPVNQWQASDIGWSQSAPLAELTGIRVPPQTERKHIILDNDSPE
AIAELAEHLKKALN

Sequences:

>Translated_254_residues
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLASDDDEIAALTIGGSLLQNSKVRKDVLSRGPHS
LYLVQDAQLEHALPLDTAKALAAAVEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLE
DDVEVIELSVPAVLCVTSDINMPRIPSMKAILGAGKKPVNQWQASDIGWSQSAPLAELTGIRVPPQTERKHIILDNDSPE
AIAELAEHLKKALN
>Mature_254_residues
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLASDDDEIAALTIGGSLLQNSKVRKDVLSRGPHS
LYLVQDAQLEHALPLDTAKALAAAVEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLE
DDVEVIELSVPAVLCVTSDINMPRIPSMKAILGAGKKPVNQWQASDIGWSQSAPLAELTGIRVPPQTERKHIILDNDSPE
AIAELAEHLKKALN

Specific function: May play a role in a redox process [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=215, Percent_Identity=26.046511627907, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI2367123, Length=254, Percent_Identity=97.244094488189, Blast_Score=501, Evalue=1e-143,
Organism=Escherichia coli, GI87081682, Length=257, Percent_Identity=55.2529182879377, Blast_Score=254, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6321646, Length=224, Percent_Identity=26.3392857142857, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27433; Mature: 27433

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLASDDDEIAALTIG
CCEEEEEEECCCCCCEEECCCEEEECCCCCCEEEHHCHHHHHHHHHHCCCCCCEEEEEEC
GSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAVEKIGFDLLIFGEGSG
HHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
DLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEEEEEECCC
NMPRIPSMKAILGAGKKPVNQWQASDIGWSQSAPLAELTGIRVPPQTERKHIILDNDSPE
CCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCHH
AIAELAEHLKKALN
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLASDDDEIAALTIG
CCEEEEEEECCCCCCEEECCCEEEECCCCCCEEEHHCHHHHHHHHHHCCCCCCEEEEEEC
GSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAVEKIGFDLLIFGEGSG
HHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
DLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEEEEEECCC
NMPRIPSMKAILGAGKKPVNQWQASDIGWSQSAPLAELTGIRVPPQTERKHIILDNDSPE
CCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCHH
AIAELAEHLKKALN
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]