| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is ylcE [C]
Identifier: 170682453
GI number: 170682453
Start: 1906146
End: 1906745
Strand: Reverse
Name: ylcE [C]
Synonym: EcSMS35_1883
Alternate gene names: 170682453
Gene position: 1906745-1906146 (Counterclockwise)
Preceding gene: 170680068
Following gene: 170681605
Centisome position: 37.62
GC content: 42.83
Gene sequence:
>600_bases ATGCTTGTTGGCGTCAGTGTTGATCGCCGGCAATGTCATCATCGGTTTAACCCGGACATCAGCGCCGGGGAAAATCCGGT GAACCCTCTTGGTCAACTCGCCCAGAATGATATCTTTTGCACCGGGCAGTCCATCAAAATTCCTTTTGCCATAAACGAGT TCCACGAACATTGCTCATTGCCTCTTTACTGGGTGTATATACAGTATTTATACTGTGTTTTTATCCGGTATTCAAGAGAG GGCGTAATGATGCCACGACGCAGCGATATTGAAATAGCCTGGTATTCTTCGATACAGCAAGAGCCGAATGGCCGGAAGAC CGTCACTACACAGCGATTTGTTCAGGGGTTGAGCAAAGTTAACTGGGAATTCTCACTCAAAGATGCTAATGCCTGGATCG AATCCAGCGTGAGCACTTTTAAATATTTATCAATGGTAGAGGGGGAAGAACGCACTTTCATGCTCTATAGCCTTGATTTA TGCGATGCACATTTCCACAACCTAGTCAGGACAACCTCTTTTCTAATAAAATGTAGATGCCTAATTTTAGGCGTCTACAT AATTAATGATGATTTATTACAATTATTTTCTAGATACTAA
Upstream 100 bases:
>100_bases ACTTAATCAGTGTGACGGTTCAAGGCGTTTAATCTGAAAACAGCTACATATCAGTCTCTTCAAACATTTCCTGAACAGTA CGGCTTATCTGTTCATTCTC
Downstream 100 bases:
>100_bases TCGTGAAATAATGACATTGAATAAATCCACGACGGGGTCATGTTAATTAACTTATCATAATTAAAGTTATCACTGTTTTC ACAGACATGCTTTGCGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLVGVSVDRRQCHHRFNPDISAGENPVNPLGQLAQNDIFCTGQSIKIPFAINEFHEHCSLPLYWVYIQYLYCVFIRYSRE GVMMPRRSDIEIAWYSSIQQEPNGRKTVTTQRFVQGLSKVNWEFSLKDANAWIESSVSTFKYLSMVEGEERTFMLYSLDL CDAHFHNLVRTTSFLIKCRCLILGVYIINDDLLQLFSRY
Sequences:
>Translated_199_residues MLVGVSVDRRQCHHRFNPDISAGENPVNPLGQLAQNDIFCTGQSIKIPFAINEFHEHCSLPLYWVYIQYLYCVFIRYSRE GVMMPRRSDIEIAWYSSIQQEPNGRKTVTTQRFVQGLSKVNWEFSLKDANAWIESSVSTFKYLSMVEGEERTFMLYSLDL CDAHFHNLVRTTSFLIKCRCLILGVYIINDDLLQLFSRY >Mature_199_residues MLVGVSVDRRQCHHRFNPDISAGENPVNPLGQLAQNDIFCTGQSIKIPFAINEFHEHCSLPLYWVYIQYLYCVFIRYSRE GVMMPRRSDIEIAWYSSIQQEPNGRKTVTTQRFVQGLSKVNWEFSLKDANAWIESSVSTFKYLSMVEGEERTFMLYSLDL CDAHFHNLVRTTSFLIKCRCLILGVYIINDDLLQLFSRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23255; Mature: 23255
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGVSVDRRQCHHRFNPDISAGENPVNPLGQLAQNDIFCTGQSIKIPFAINEFHEHCSL CEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEECCCCEEEEEEHHHHHHHCCC PLYWVYIQYLYCVFIRYSREGVMMPRRSDIEIAWYSSIQQEPNGRKTVTTQRFVQGLSKV CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHC NWEFSLKDANAWIESSVSTFKYLSMVEGEERTFMLYSLDLCDAHFHNLVRTTSFLIKCRC CCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH LILGVYIINDDLLQLFSRY HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVGVSVDRRQCHHRFNPDISAGENPVNPLGQLAQNDIFCTGQSIKIPFAINEFHEHCSL CEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEECCCCEEEEEEHHHHHHHCCC PLYWVYIQYLYCVFIRYSREGVMMPRRSDIEIAWYSSIQQEPNGRKTVTTQRFVQGLSKV CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHC NWEFSLKDANAWIESSVSTFKYLSMVEGEERTFMLYSLDLCDAHFHNLVRTTSFLIKCRC CCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH LILGVYIINDDLLQLFSRY HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA