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The map label for this gene is ydcY

Identifier: 170681585

GI number: 170681585

Start: 1733355

End: 1733588

Strand: Reverse

Name: ydcY

Synonym: EcSMS35_1727

Alternate gene names: 170681585

Gene position: 1733588-1733355 (Counterclockwise)

Preceding gene: 170681752

Following gene: 170682763

Centisome position: 34.2

GC content: 53.85

Gene sequence:

>234_bases
ATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATTATT
AATCGCCCTGAGCGATGACGCGGAGTTAAGTCGGGAAGATCGCTACACCCAGCAGCAGCGTTTGCGCACAGCGATCGCCC
ATCACGGTCGCAAGCATAAAGAAGATATGGAAGCGCGCCATGAACAGTTAACCAAAGGCGGCACCATCCTGTGA

Upstream 100 bases:

>100_bases
TTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCACCACGCAGACTTATATCATTTGGATGAATCGATAAATTTCA
CAAGTGGCTAAGGAGAAAGT

Downstream 100 bases:

>100_bases
TTAAAATGAGCGTCTGGCTACCAACCAGGCGCCAACCACAAGTAAAATTGCGCCACAAATTGGGCCGAACAACGCCCGTA
GTGGTACGCCATGACTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL

Sequences:

>Translated_77_residues
MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL
>Mature_76_residues
SHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787717, Length=77, Percent_Identity=100, Blast_Score=153, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDCY_ECO57 (P64457)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B90885
- PIR:   E85733
- RefSeq:   NP_287715.1
- RefSeq:   NP_310077.1
- ProteinModelPortal:   P64457
- EnsemblBacteria:   EBESCT00000027991
- EnsemblBacteria:   EBESCT00000059734
- GeneID:   917249
- GeneID:   960818
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2273
- KEGG:   ecs:ECs2050
- GeneTree:   EBGT00050000009235
- HOGENOM:   HBG416159
- OMA:   ITHMNEL
- ProtClustDB:   CLSK880064
- BioCyc:   ECOL83334:ECS2050-MONOMER
- InterPro:   IPR019671

Pfam domain/function: PF10735 DUF2526

EC number: NA

Molecular weight: Translated: 8800; Mature: 8669

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDMEARHEQLTKGGTIL
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDMEARHEQLTKGGTIL
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796