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The map label for this gene is ydhJ [H]

Identifier: 170681193

GI number: 170681193

Start: 1540735

End: 1541592

Strand: Reverse

Name: ydhJ [H]

Synonym: EcSMS35_1554

Alternate gene names: 170681193

Gene position: 1541592-1540735 (Counterclockwise)

Preceding gene: 170681662

Following gene: 170682942

Centisome position: 30.42

GC content: 50.47

Gene sequence:

>858_bases
ATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAA
TTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAACAGGTTTCTATCACCCCTCAGGTGTCGGGAC
GTATTGTTGAGCTGAATATAAAAGACAACCAGCTGGTTAACGCGGGGGATCTTCTGCTCACGATCGATAAAACGCCCTTT
AAGATCGCCGAGCTGAACGCACAGGCTCAGCTGGCGAAAGCGCAATCTGACCTCGCAAAAGCCAATAACGAAGCGAATCG
TCGTCGTCATCTCTCACAAAATTTTATTTCTGCCGAAGAACTCGATACCGCTAACCTCAATGTTAAAGCGATGCAGGCCA
GTGTTGATGCCGCACAGGCGACGCTGAAACAGGCACAATGGCAACTGGCGCAAACGGAAATTCGCGCCCCGGTGAGTGGA
TGGGTGACTAACCTCACTACCCGCATCGGCGATTACGCTGACACAGGGAAACCGCTGTTTGCCCTTGTCGACAGCCACTC
GTTTTACGTCATTGGTTATTTTGAAGAAACCAAGTTGCGCCATATCCGCGAAGGTGCACCAGCACAAATTACCCTCTATA
GTGATAACAAAACGTTACAGGGTCACGTTTCCAGTATCGGTCGGGCGATTTATGATCAGAGCGTTGAAAGTGACTCAAGC
CTTATTCCGGATGTGAAACCTAACGTCCCCTGGGTTCGACTCGCCCAACGCGTTCCCGTCCGCTTTGCGCTGGATAAAGT
CCCAGGCGATGTCACGCTGGTGTCGGGCACCACCTGTAGCATTGCCGTAGGTCAATAA

Upstream 100 bases:

>100_bases
GGATCTACGCTGGTGACATCTGGCATCCCTTGTTAATGGATTTATCGCTGTTTGCGATTTGCGTTTGCCTTGCCCTGGCA
ATACTGATTGCGTGGTAACT

Downstream 100 bases:

>100_bases
TGAACGCATCGTCATGGTCCTTGCGCAATTTGCCCTGGTTCAGGGCCACGCTGGCGCAATGGCGTTATGCGTTACGCAAT
ACCATTGCCATGTGTCTGGC

Product: MFP family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPF
KIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSG
WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSS
LIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ

Sequences:

>Translated_285_residues
MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPF
KIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSG
WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSS
LIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ
>Mature_284_residues
SIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFK
IAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGW
VTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSSL
IPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=285, Percent_Identity=99.6491228070175, Blast_Score=583, Evalue=1e-168,
Organism=Escherichia coli, GI1789637, Length=282, Percent_Identity=40.4255319148936, Blast_Score=200, Evalue=9e-53,
Organism=Escherichia coli, GI1790519, Length=293, Percent_Identity=33.4470989761092, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1788711, Length=311, Percent_Identity=27.9742765273312, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789041, Length=304, Percent_Identity=27.6315789473684, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87082036, Length=161, Percent_Identity=31.055900621118, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790012, Length=269, Percent_Identity=23.4200743494424, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789929, Length=130, Percent_Identity=34.6153846153846, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 31496; Mature: 31365

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEEE
KDNQLVNAGDLLLTIDKTPFKIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEE
CCCCEECCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
LDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLF
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEE
ALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSS
EEEECCCEEEEEEECHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
LIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ
CCCCCCCCCCHHHHHHHCCEEEEEECCCCCEEEEECCEEEEEECC
>Mature Secondary Structure 
SIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEEE
KDNQLVNAGDLLLTIDKTPFKIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEE
CCCCEECCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
LDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLF
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEE
ALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSS
EEEECCCEEEEEEECHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
LIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ
CCCCCCCCCCHHHHHHHCCEEEEEECCCCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]