Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
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Accession | NC_010498 |
Length | 5,068,389 |
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The map label for this gene is ymgC [H]
Identifier: 170680345
GI number: 170680345
Start: 2004715
End: 2004891
Strand: Reverse
Name: ymgC [H]
Synonym: EcSMS35_1984
Alternate gene names: 170680345
Gene position: 2004891-2004715 (Counterclockwise)
Preceding gene: 170683970
Following gene: 170683384
Centisome position: 39.56
GC content: 35.59
Gene sequence:
>177_bases ATGACGCATGGGTATGTTGATAGTTATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCT TTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGG AATCCGTGATCTCTTAG
Upstream 100 bases:
>100_bases ATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTGCAATGTGCTTTGTTTAAAA ATCTCGAGAGGGAGGTGTTC
Downstream 100 bases:
>100_bases AACTTGAGTAAGGTTATAGAATAAACATCAGCTGTATTACCATGCTGGTGCAAAGTGAGCATTTCAGGCGTTATGCTTTC TTAATATGTCCGCAATATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MTHGYVDSYIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVIS
Sequences:
>Translated_58_residues MTHGYVDSYIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVIS >Mature_57_residues THGYVDSYIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787414, Length=58, Percent_Identity=96.551724137931, Blast_Score=112, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6799; Mature: 6668
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGYVDSYIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVIS CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure THGYVDSYIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVIS CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]