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The map label for this gene is yeaW [H]

Identifier: 170679804

GI number: 170679804

Start: 1374296

End: 1375420

Strand: Reverse

Name: yeaW [H]

Synonym: EcSMS35_1386

Alternate gene names: 170679804

Gene position: 1375420-1374296 (Counterclockwise)

Preceding gene: 170681413

Following gene: 170680439

Centisome position: 27.14

GC content: 51.82

Gene sequence:

>1125_bases
ATGAGCAATCTGAGCCCTGACTTTGTACTACCCGAAAATTTTTGCGCTAACCCGCAAGAGGCGTGGACCATTCCTGCCCG
TTTTTATACCGATCAGAACGCCTTTGAACACGAAAAAGAGAGCGTCTTCGCCAAAAGCTGGATTTGCGTCGCTCACAGCA
GCGAACTGGCGAATGCCAATGATTATGTGACGCGTGAGATCATTGGCGAAAGCATTGTGCTGGTACGCGGTCGTGATAAG
GTTTTGCGCGCGTTCTATAACGTGTGTCCGCACCGTGGTCATCAGTTGTTGAGCGGTGAAGGAAAAGCGAAAAATGTGAT
TACCTGCCCATATCACGCATGGGCATTCAAACTCGATGGCAACCTGGCCCATGCACGTAACTGCGAAAACGTCGCCAATT
TCGATAGCGACAAAGCGCAACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCTAAC
GCCACCAGCGTAGAAGATCAGTTACCCGGTCTGGGGGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGACCTGAAACT
GGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGAACATTGTCGATAACTATCTCGAGTGCTATCACTGTGGTC
CGGCGCATCCAGGTTTCTCCGACTCCGTACAGGTTGATCGTTACTGGCACACCATGCACGGTAACTGGACGCTGCAATAC
GGTTTCGCCAAACCGTCCGAACAGTCTTTCAAATTCGAAGAGGGCACGGATGCGGCATTCCACGGTTTCTGGCTGTGGCC
GTGCACGATGCTGAACGTCACCCCAATCAAAGGGATGATGACGGCCATTTATGAATTCCCAGTGGATTCTGAAACTACCC
TGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTG
TTCCGTCCGGAAGATTTACGTCTGGTTGAAAGCGTACAGAAAGGGCTGAAATCGCGTGGCTATCGTGGTCAGGGGCGCAT
CATGGCCGACAGTAGCGGTAGCGGAATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGG
ACTAA

Upstream 100 bases:

>100_bases
ACACCGGTTGAAGCCCTGGAAAAAACACCAGTGCTCCCTGCGGGAACCGTATTCAAAGGCGACAACTGAGCGCCATCATC
CTAACGATAAAGGTATCCCT

Downstream 100 bases:

>100_bases
TGACATCAGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAG
TACAGGTGAACCAAATTGAA

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANANDYVTREIIGESIVLVRGRDK
VLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQY
GFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTAIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDV
FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD

Sequences:

>Translated_374_residues
MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANANDYVTREIIGESIVLVRGRDK
VLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQY
GFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTAIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDV
FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD
>Mature_373_residues
SNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANANDYVTREIIGESIVLVRGRDKV
LRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPNA
TSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYG
FAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTAIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVF
RPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=374, Percent_Identity=99.4652406417112, Blast_Score=787, Evalue=0.0,
Organism=Escherichia coli, GI1788888, Length=154, Percent_Identity=27.9220779220779, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42506; Mature: 42375

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANAN
CCCCCCCEECCCHHCCCCHHHEECCCEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCC
DYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDG
HHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCEECCCCCCCCCEEECCCEEEEEEECC
NLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACP
CCHHHCCCCHHHCCCCCCCEEEEEEEHHHCCEEEEEECCCCCCHHHHCCCCCHHHHHHCC
EVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQY
CHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCEEEEE
GFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTAIYEFPVDSETTLQNYDIY
CCCCCCCCCCCCCCCCCCEECCEEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEE
FTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG
ECCCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH
IAHFHNLLAQVFKD
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANAN
CCCCCCEECCCHHCCCCHHHEECCCEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCC
DYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDG
HHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCEECCCCCCCCCEEECCCEEEEEEECC
NLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACP
CCHHHCCCCHHHCCCCCCCEEEEEEEHHHCCEEEEEECCCCCCHHHHCCCCCHHHHHHCC
EVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQY
CHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCEEEEE
GFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTAIYEFPVDSETTLQNYDIY
CCCCCCCCCCCCCCCCCCEECCEEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEE
FTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG
ECCCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH
IAHFHNLLAQVFKD
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]