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The map label for this gene is frr

Identifier: 170077573

GI number: 170077573

Start: 982676

End: 983224

Strand: Reverse

Name: frr

Synonym: SYNPCC7002_A0952

Alternate gene names: 170077573

Gene position: 983224-982676 (Counterclockwise)

Preceding gene: 170077574

Following gene: 170077572

Centisome position: 32.69

GC content: 48.09

Gene sequence:

>549_bases
GTGCAGTTAAGTGAACTTAGAGAAAATATGCAAAAGACCATTGAGGCAACCCAGCGGTCTTTTAATACCCTCCGGACAGG
GAGAGCCAGCGCCTCCCTCCTCGACCGGATTACGGTGGAATATTACGGTGCAGAAACTCCCCTAAAATCGTTGGCGAGTA
TTTCGACACCCGACTCCAGCACTATCATGATCCAACCCTTTGATCGGGGTAGTTTGAGTGATGTGGAGCGGGCCATTTCC
ATGTCTGATTTGGGTCTGACCCCCAACAATGATGGGACAAATATCCGCTTAAATATTCCGCCGCTGACGAAGGAGCGCCG
TCAAGAATTGGTCAAAACGGCTGGAAAATTAGCTGAAGAAGGAAAAGTTGCCCTCCGCAATATTCGCCGTGATGCCATTG
ATGATGTGCGCAAACAGGAGAAAAATAGCGACATTTCCGAGGATGAATCCCGTAGCTTACAGGACGATATCCAGAAGGTG
ACGGACGAGTTTACGACAAAAATCGATGACCTGCTCAAGATCAAAGAAAAAGACATTATGACGGTCTAG

Upstream 100 bases:

>100_bases
GAAAACGACATCCCGATTATGGTGTTTAATCTATTTGAGAAAGGCAACATTGTCCGTGCCGTTAAAGGTGAACCAGTTGG
AACAATCGTGGGAGGTTCCT

Downstream 100 bases:

>100_bases
GGCCGCACTCGGTAGACTAGAGGGAGGCCCAAAGGCCTTCTTTTTTTGTTGAATATCCTAGAAATTAGTGTTGTGATGCA
TAGTTTAACGTCTGATTTAA

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MQLSELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTIMIQPFDRGSLSDVERAIS
MSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKV
TDEFTTKIDDLLKIKEKDIMTV

Sequences:

>Translated_182_residues
MQLSELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTIMIQPFDRGSLSDVERAIS
MSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKV
TDEFTTKIDDLLKIKEKDIMTV
>Mature_182_residues
MQLSELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTIMIQPFDRGSLSDVERAIS
MSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKV
TDEFTTKIDDLLKIKEKDIMTV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family

Homologues:

Organism=Homo sapiens, GI20270317, Length=182, Percent_Identity=29.1208791208791, Blast_Score=76, Evalue=1e-14,
Organism=Escherichia coli, GI1786368, Length=182, Percent_Identity=48.9010989010989, Blast_Score=166, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24661488, Length=177, Percent_Identity=29.3785310734463, Blast_Score=80, Evalue=9e-16,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): RRF_SYNP2 (B1XJ13)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734211.1
- ProteinModelPortal:   B1XJ13
- SMR:   B1XJ13
- GeneID:   6057017
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0952
- HOGENOM:   HBG533975
- OMA:   YYGAETP
- ProtClustDB:   PRK00083
- GO:   GO:0005737
- HAMAP:   MF_00040
- InterPro:   IPR002661
- InterPro:   IPR015998
- PANTHER:   PTHR20982
- PANTHER:   PTHR20982:SF3
- TIGRFAMs:   TIGR00496

Pfam domain/function: PF01765 RRF; SSF55194 Ribosome_recyc_fac

EC number: NA

Molecular weight: Translated: 20501; Mature: 20501

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSS
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
TIMIQPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEE
EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKVTDEFTTKIDDLLKIKEKDIM
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TV
CC
>Mature Secondary Structure
MQLSELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSS
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
TIMIQPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEE
EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKVTDEFTTKIDDLLKIKEKDIM
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA