| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is chlM [H]
Identifier: 170077530
GI number: 170077530
Start: 941625
End: 942320
Strand: Reverse
Name: chlM [H]
Synonym: SYNPCC7002_A0908
Alternate gene names: 170077530
Gene position: 942320-941625 (Counterclockwise)
Preceding gene: 170077531
Following gene: 170077528
Centisome position: 31.33
GC content: 49.71
Gene sequence:
>696_bases ATGACCTCCTCCCTCAATGACAAAACCATCGTCAAAGATTATTTCAATGCCAAGGGCTTTGACCGTTGGCGACGCATTTA TGGTGACGGGGATGTCAACAAAGTCCAGGCTGATATCCGCGTCGGGCACCAACAGACCATTGATAAGGTGGTGGCTTGGC TTAAGGCCGATCAAAATCTCAACCTCAGAAGCATTTGTGATGCTGGCTGTGGGGTCGGTAGCCTCAGTATTCCCCTCATG GAGGCCGGTGCCCGCTCAATCTATGCCAGCGATATTTCTGAAAAAATGGTCGGTGAAGCCCAGGAACGGGCCGCAAAAAT CTTTGGCAACACCCCTAATCTGAAGTTTGAAACCAAAGATCTCGAAAGCATCAGCGGCAAATACAATACGGTGATTTGCT TGGATGTGCTGATCCACTACCCCACCGAGGATGCGGCAAAAATGATTGCCCACTTGGCATCCCTCAGCGAAGATCGCTTG ATCTTGAGCTTTGCGCCGAAAACGTTTTGGTTGACGATCCTCAAGAAAATTGGTGAATTCTTCCCTGGCCCCAGCAAAAC CACCCGCGCCTACCAACACAAGGAACAGGATATCCGCCAAATCTTAATTGATAATGGTTTTGCGATCGCCCGCACCGAAA TGACCAGTACCCGTTTTTACTATTCCCGTTTGTTGGAAGCGGTTCGCCTTCGGTAA
Upstream 100 bases:
>100_bases CAATGGTCCCCCACAGAACAATCACCCTAGGGTTTCCCAAAGCTGCTACATTATTGGATCGATAACAAAATCCTTTAATT TTTTTTGAATCCAAAGCGCC
Downstream 100 bases:
>100_bases TAAATATTGCCTGAAATTTCCTAAGGAGACTTTGCGTCGAATAAGGGGGCTACGTAGGAACACCAATCACTCCAGCCCCC AGGGTACAGTTTCAAATTAT
Product: Mg-protoporphyrin IX methyl transferase
Products: NA
Alternate protein names: Magnesium-protoporphyrin IX methyltransferase [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTSSLNDKTIVKDYFNAKGFDRWRRIYGDGDVNKVQADIRVGHQQTIDKVVAWLKADQNLNLRSICDAGCGVGSLSIPLM EAGARSIYASDISEKMVGEAQERAAKIFGNTPNLKFETKDLESISGKYNTVICLDVLIHYPTEDAAKMIAHLASLSEDRL ILSFAPKTFWLTILKKIGEFFPGPSKTTRAYQHKEQDIRQILIDNGFAIARTEMTSTRFYYSRLLEAVRLR
Sequences:
>Translated_231_residues MTSSLNDKTIVKDYFNAKGFDRWRRIYGDGDVNKVQADIRVGHQQTIDKVVAWLKADQNLNLRSICDAGCGVGSLSIPLM EAGARSIYASDISEKMVGEAQERAAKIFGNTPNLKFETKDLESISGKYNTVICLDVLIHYPTEDAAKMIAHLASLSEDRL ILSFAPKTFWLTILKKIGEFFPGPSKTTRAYQHKEQDIRQILIDNGFAIARTEMTSTRFYYSRLLEAVRLR >Mature_230_residues TSSLNDKTIVKDYFNAKGFDRWRRIYGDGDVNKVQADIRVGHQQTIDKVVAWLKADQNLNLRSICDAGCGVGSLSIPLME AGARSIYASDISEKMVGEAQERAAKIFGNTPNLKFETKDLESISGKYNTVICLDVLIHYPTEDAAKMIAHLASLSEDRLI LSFAPKTFWLTILKKIGEFFPGPSKTTRAYQHKEQDIRQILIDNGFAIARTEMTSTRFYYSRLLEAVRLR
Specific function: Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor [H]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010251 - InterPro: IPR010940 [H]
Pfam domain/function: PF07109 Mg-por_mtran_C [H]
EC number: =2.1.1.11 [H]
Molecular weight: Translated: 26061; Mature: 25930
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSLNDKTIVKDYFNAKGFDRWRRIYGDGDVNKVQADIRVGHQQTIDKVVAWLKADQNL CCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCC NLRSICDAGCGVGSLSIPLMEAGARSIYASDISEKMVGEAQERAAKIFGNTPNLKFETKD CHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCH LESISGKYNTVICLDVLIHYPTEDAAKMIAHLASLSEDRLILSFAPKTFWLTILKKIGEF HHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH FPGPSKTTRAYQHKEQDIRQILIDNGFAIARTEMTSTRFYYSRLLEAVRLR CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSSLNDKTIVKDYFNAKGFDRWRRIYGDGDVNKVQADIRVGHQQTIDKVVAWLKADQNL CCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCC NLRSICDAGCGVGSLSIPLMEAGARSIYASDISEKMVGEAQERAAKIFGNTPNLKFETKD CHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCH LESISGKYNTVICLDVLIHYPTEDAAKMIAHLASLSEDRLILSFAPKTFWLTILKKIGEF HHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH FPGPSKTTRAYQHKEQDIRQILIDNGFAIARTEMTSTRFYYSRLLEAVRLR CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704138; 8590279; 8905231 [H]