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The map label for this gene is cobL [H]

Identifier: 170077520

GI number: 170077520

Start: 930090

End: 930680

Strand: Reverse

Name: cobL [H]

Synonym: SYNPCC7002_A0898

Alternate gene names: 170077520

Gene position: 930680-930090 (Counterclockwise)

Preceding gene: 170077521

Following gene: 170077519

Centisome position: 30.94

GC content: 53.64

Gene sequence:

>591_bases
ATGGCTTGGCATTACCAGACCCCTGGCATTCCGGATCACCTATTTAAACGTTTACCGGGCATTCCCCTGACGAAACGGGA
AGCGCGGCTTTTGATTATCTCGGCCCTACGGATGGAGGCGGATTCTGTACTCTGGGATATTGGGGCCGGGACGGGGACAA
TTTCCGTTGAGATCGCCCTTTTATGCCCCCAAGCCCAGGTGATCGCCGTTGAACGGGATGAGGAGGTCGCGGATTTAGTG
CGTCGCAATTGTGCACATTTTCAAACCGACAATATTACGGTGATTGAGGGGAATGCACCGGAATGTTTTGCCCAGATTGC
CACGAAGCCGGATCGGATTTGTCTTGGGGGTGGCAAACCGATCAAAGTTCTGTTGAGTGAGGCTTGGCAATGCTTACGGC
AAGGGGGCCGAGCGGTGGCGATGGCGACTAACTTGGAGCAGCTTTATCAGCTTTCGGAGGGTTTTTCGGAACTGCAGGCC
CGGAATGTGGAAGTGGTCCAGGCGGCAATTAACCGTTTAGAAACCCAGGGAATGCGCCAGGTGTTTGCGGCGGTAGACCC
GATGTTTATCTTGAGTGGGGAAAAAATTTAG

Upstream 100 bases:

>100_bases
GAGGCAGGTCACTCGGCCTTTGAACCGGGCATTCAAACGGAATTATTGAACGCAACGGATGCGTTTGCAACCCTATAGTT
TTTATTTTTTAGCAGCACTT

Downstream 100 bases:

>100_bases
GGGTAGAAAATGCTTGTAAAATAAACCCCTGCCCCTGGATGGAGAGAGACAAAACGATGCGCCCCCGAAAACGGTTTGGT
CAACATTGGCTGACGGATCA

Product: precorrin-6B methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAWHYQTPGIPDHLFKRLPGIPLTKREARLLIISALRMEADSVLWDIGAGTGTISVEIALLCPQAQVIAVERDEEVADLV
RRNCAHFQTDNITVIEGNAPECFAQIATKPDRICLGGGKPIKVLLSEAWQCLRQGGRAVAMATNLEQLYQLSEGFSELQA
RNVEVVQAAINRLETQGMRQVFAAVDPMFILSGEKI

Sequences:

>Translated_196_residues
MAWHYQTPGIPDHLFKRLPGIPLTKREARLLIISALRMEADSVLWDIGAGTGTISVEIALLCPQAQVIAVERDEEVADLV
RRNCAHFQTDNITVIEGNAPECFAQIATKPDRICLGGGKPIKVLLSEAWQCLRQGGRAVAMATNLEQLYQLSEGFSELQA
RNVEVVQAAINRLETQGMRQVFAAVDPMFILSGEKI
>Mature_195_residues
AWHYQTPGIPDHLFKRLPGIPLTKREARLLIISALRMEADSVLWDIGAGTGTISVEIALLCPQAQVIAVERDEEVADLVR
RNCAHFQTDNITVIEGNAPECFAQIATKPDRICLGGGKPIKVLLSEAWQCLRQGGRAVAMATNLEQLYQLSEGFSELQAR
NVEVVQAAINRLETQGMRQVFAAVDPMFILSGEKI

Specific function: Probably catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W. Methylation of C-15 would probably be followed by a spontaneous decarboxylation of C-12 [H]

COG id: COG2242

COG function: function code H; Precorrin-6B methylase 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Archaeal-type CbiT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014008
- InterPro:   IPR010456 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: 1.-.-.-

Molecular weight: Translated: 21594; Mature: 21463

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01131 RRNA_A_DIMETH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWHYQTPGIPDHLFKRLPGIPLTKREARLLIISALRMEADSVLWDIGAGTGTISVEIAL
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEE
LCPQAQVIAVERDEEVADLVRRNCAHFQTDNITVIEGNAPECFAQIATKPDRICLGGGKP
ECCCCEEEEEECCHHHHHHHHHHHCCEECCCEEEEECCCHHHHHHHCCCCCEEEECCCCH
IKVLLSEAWQCLRQGGRAVAMATNLEQLYQLSEGFSELQARNVEVVQAAINRLETQGMRQ
HHHHHHHHHHHHHHCCCEEEEHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VFAAVDPMFILSGEKI
HHHHHCCEEEECCCCC
>Mature Secondary Structure 
AWHYQTPGIPDHLFKRLPGIPLTKREARLLIISALRMEADSVLWDIGAGTGTISVEIAL
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEE
LCPQAQVIAVERDEEVADLVRRNCAHFQTDNITVIEGNAPECFAQIATKPDRICLGGGKP
ECCCCEEEEEECCHHHHHHHHHHHCCEECCCEEEEECCCHHHHHHHCCCCCEEEECCCCH
IKVLLSEAWQCLRQGGRAVAMATNLEQLYQLSEGFSELQARNVEVVQAAINRLETQGMRQ
HHHHHHHHHHHHHHCCCEEEEHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VFAAVDPMFILSGEKI
HHHHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA