| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077441
Identifier: 170077441
GI number: 170077441
Start: 845258
End: 845671
Strand: Reverse
Name: 170077441
Synonym: SYNPCC7002_A0819
Alternate gene names: NA
Gene position: 845671-845258 (Counterclockwise)
Preceding gene: 170077442
Following gene: 170077438
Centisome position: 28.11
GC content: 41.06
Gene sequence:
>414_bases ATGAATAAATGCCGCATCATTATTGATACCAACGTACTTGTCAGTGCTTTGGTTTTCTCAAGTTACAACTTCCATACAGT TGTAACTTTCGCTCAAAAACAGGGCATTATCCTGACGTCTTTAGATGTTTTGTCAGAATTAAGTGAGGTTCTCAATCGAC AAAAATTTGACCGTTATCTGACCAGAGAAATCAGAGACGATTTTTTAACAAGCTTGGCACTAGCCTCTGAAATTGTTCCC ATCATCGAAAAAGTTTCGGTCTGCCGCGACCCCAAAGATGACAAATTCCTTGAACTCATTGTCAATGGCAAGGCTGATTT TCTCATCACAGGCGATCAAGATTTACTCGCTCTCCATCCCTTTCGAGACGCTTCCATTCTTACCGTCCAAGACTTCCTGC AAGCTGTTAACTAA
Upstream 100 bases:
>100_bases GCAATTAACCCCAAACCACTCCTAGAAGTCATGGAAACGGCGAGTCAGCAAGCTATTGCCCAAGGCATGACACCGGAGAT TTTAGAAACAATTTTGGCGG
Downstream 100 bases:
>100_bases GGAATTTGATTTGGCCTTAAGCTAATTGTGGCTGTAATTCAAGAACAGCTTGTCTGGCCCATTGATCTGCCTGCAAAATG TCGTCTAGGGTCGGGTTTGT
Product: PilT domain-containing protein
Products: NA
Alternate protein names: PilT Domain-Containing Protein
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNKCRIIIDTNVLVSALVFSSYNFHTVVTFAQKQGIILTSLDVLSELSEVLNRQKFDRYLTREIRDDFLTSLALASEIVP IIEKVSVCRDPKDDKFLELIVNGKADFLITGDQDLLALHPFRDASILTVQDFLQAVN
Sequences:
>Translated_137_residues MNKCRIIIDTNVLVSALVFSSYNFHTVVTFAQKQGIILTSLDVLSELSEVLNRQKFDRYLTREIRDDFLTSLALASEIVP IIEKVSVCRDPKDDKFLELIVNGKADFLITGDQDLLALHPFRDASILTVQDFLQAVN >Mature_137_residues MNKCRIIIDTNVLVSALVFSSYNFHTVVTFAQKQGIILTSLDVLSELSEVLNRQKFDRYLTREIRDDFLTSLALASEIVP IIEKVSVCRDPKDDKFLELIVNGKADFLITGDQDLLALHPFRDASILTVQDFLQAVN
Specific function: Unknown
COG id: COG1569
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15503; Mature: 15503
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKCRIIIDTNVLVSALVFSSYNFHTVVTFAQKQGIILTSLDVLSELSEVLNRQKFDRYL CCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHH TREIRDDFLTSLALASEIVPIIEKVSVCRDPKDDKFLELIVNGKADFLITGDQDLLALHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCEEEECC FRDASILTVQDFLQAVN CCCCCEEEHHHHHHHCC >Mature Secondary Structure MNKCRIIIDTNVLVSALVFSSYNFHTVVTFAQKQGIILTSLDVLSELSEVLNRQKFDRYL CCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHH TREIRDDFLTSLALASEIVPIIEKVSVCRDPKDDKFLELIVNGKADFLITGDQDLLALHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCEEEECC FRDASILTVQDFLQAVN CCCCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA