| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077415
Identifier: 170077415
GI number: 170077415
Start: 821085
End: 821648
Strand: Reverse
Name: 170077415
Synonym: SYNPCC7002_A0793
Alternate gene names: NA
Gene position: 821648-821085 (Counterclockwise)
Preceding gene: 170077416
Following gene: 170077414
Centisome position: 27.31
GC content: 49.11
Gene sequence:
>564_bases ATGGCTAGAGTACCTGACGTTGTCTTCAAAACCCGCGTCCGCGATGAATCCGTAGAAGGCCCCAACCCCTACCGTTGGGA AGACAAAACCACCGCTGACATTTTCGGTGGCAAGAAAGTTGTTCTTTTCTCCCTGCCTGGTGCTTTCACGCCCACTTGTT CCTCCAACCACTTACCCCGTTACGAAGAGCTTTATAGCGAATTCCAAGCCCAGGGCGTTGATGAAATCATCTGTCTGTCT GTAAACGATGCTTTCGTAATGTTCAAGTGGGGTAAGGAGATCGGTGCTGACAAAGTCTTCCTCCTTCCCGATGGTAACGG TGAATTTACCCGCAAAATGGGGATGCTCGTTGAGAAGTCTAACCTCGGTTTTGGGATGCGTTCTTGGCGCTACTCCATGC TCGTCGAAGATGGCGAAATCAAGAAAATGTTTGTAGAGCCTGACTTCTCTGATAACTGCCCCACCGATCCTTTTGAAGTA TCTGATGCAGATACCATGCTGGCTTACATCAAGGGCGAATCTGCTCCTGGTGTTTCTGAACCCCGCAAAGAATTTGTTGG CTAA
Upstream 100 bases:
>100_bases GAATCTTGACTTATTCCTAAATAAGAATTATTCTGGCTTATTAAGAAAGGTTGAGACCTTTCCTAAAATTTTCTGTTATC ACACTATCCAAGAGGTCCAC
Downstream 100 bases:
>100_bases GTTTCTATCACTGACGCTCACCAAATAATTTTTTTAGACTAAGGCAAGGGGGGCGGCGATCGCCTTCTTTGCCTTTTTGA TTTCTCGTACCACCGCCAAA
Product: AhpC/TSA family protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MARVPDVVFKTRVRDESVEGPNPYRWEDKTTADIFGGKKVVLFSLPGAFTPTCSSNHLPRYEELYSEFQAQGVDEIICLS VNDAFVMFKWGKEIGADKVFLLPDGNGEFTRKMGMLVEKSNLGFGMRSWRYSMLVEDGEIKKMFVEPDFSDNCPTDPFEV SDADTMLAYIKGESAPGVSEPRKEFVG
Sequences:
>Translated_187_residues MARVPDVVFKTRVRDESVEGPNPYRWEDKTTADIFGGKKVVLFSLPGAFTPTCSSNHLPRYEELYSEFQAQGVDEIICLS VNDAFVMFKWGKEIGADKVFLLPDGNGEFTRKMGMLVEKSNLGFGMRSWRYSMLVEDGEIKKMFVEPDFSDNCPTDPFEV SDADTMLAYIKGESAPGVSEPRKEFVG >Mature_186_residues ARVPDVVFKTRVRDESVEGPNPYRWEDKTTADIFGGKKVVLFSLPGAFTPTCSSNHLPRYEELYSEFQAQGVDEIICLSV NDAFVMFKWGKEIGADKVFLLPDGNGEFTRKMGMLVEKSNLGFGMRSWRYSMLVEDGEIKKMFVEPDFSDNCPTDPFEVS DADTMLAYIKGESAPGVSEPRKEFVG
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=135, Percent_Identity=45.1851851851852, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI78706776, Length=121, Percent_Identity=52.0661157024793, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI78709078, Length=121, Percent_Identity=52.0661157024793, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 21036; Mature: 20905
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVPDVVFKTRVRDESVEGPNPYRWEDKTTADIFGGKKVVLFSLPGAFTPTCSSNHLPR CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCH YEELYSEFQAQGVDEIICLSVNDAFVMFKWGKEIGADKVFLLPDGNGEFTRKMGMLVEKS HHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCHHHHHHCEEEEEC NLGFGMRSWRYSMLVEDGEIKKMFVEPDFSDNCPTDPFEVSDADTMLAYIKGESAPGVSE CCCCCHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC PRKEFVG HHHHHCC >Mature Secondary Structure ARVPDVVFKTRVRDESVEGPNPYRWEDKTTADIFGGKKVVLFSLPGAFTPTCSSNHLPR CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCH YEELYSEFQAQGVDEIICLSVNDAFVMFKWGKEIGADKVFLLPDGNGEFTRKMGMLVEKS HHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCHHHHHHCEEEEEC NLGFGMRSWRYSMLVEDGEIKKMFVEPDFSDNCPTDPFEVSDADTMLAYIKGESAPGVSE CCCCCHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC PRKEFVG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]