| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077398
Identifier: 170077398
GI number: 170077398
Start: 804730
End: 805200
Strand: Reverse
Name: 170077398
Synonym: SYNPCC7002_A0775
Alternate gene names: NA
Gene position: 805200-804730 (Counterclockwise)
Preceding gene: 170077399
Following gene: 170077397
Centisome position: 26.77
GC content: 50.96
Gene sequence:
>471_bases ATGCCGGACATTTTGCAGTACATTGCCGCCCATAATCTGGTTTTAGGTACGGGCCACATTTCCCCAGCAGAAATTCTCAC CGTTGTCCCTGCGGCGAAACAATTGGGCGTTGAAAAAATCCTCATAACCCATGCCATGGCCACCGTACCAGGATTAACCC TCGCACAAATGCAGGCGATCGCCGACCAAGGGGCTTTTTTAGAATTAACCTACGTGAATACATTGATGGGAGAAAACGCT ACCGAAGCCGACCACCAAGCTTGGGAGAATGTGAGCATTGAAACAATGGCGAAGGCAATCCAAACCATCGGCGCAACCCA CTTTGTCCTGAGCACCGACCTCGGACGAGCCCTTGATCCATCGCCCATTGAAGGCTACCAGCGATTTTTAGAACAGTTGG CGGCGGCGGGCATTTCTGAAGCTGACCTGTACCTGATGAGCCACACCAACCCCGAAAAACTTTTACAATAA
Upstream 100 bases:
>100_bases CGTTTGGCTACCCACCATTGATGCGGCCCACCATCGTCAGACCCTAAACCACCGCTTTGGGGGATTGCGGGTGGCCCGCT ATGGCCATCTGGTGCCAGAA
Downstream 100 bases:
>100_bases AAGCCACTTTTAGTAAGCAACAAACGGCAAATAATGATTTGGCAAGAGTCTGGTGGCAGTTGGATTTTAATCCCAGTACA ACCGGTGGGGGTGATTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPDILQYIAAHNLVLGTGHISPAEILTVVPAAKQLGVEKILITHAMATVPGLTLAQMQAIADQGAFLELTYVNTLMGENA TEADHQAWENVSIETMAKAIQTIGATHFVLSTDLGRALDPSPIEGYQRFLEQLAAAGISEADLYLMSHTNPEKLLQ
Sequences:
>Translated_156_residues MPDILQYIAAHNLVLGTGHISPAEILTVVPAAKQLGVEKILITHAMATVPGLTLAQMQAIADQGAFLELTYVNTLMGENA TEADHQAWENVSIETMAKAIQTIGATHFVLSTDLGRALDPSPIEGYQRFLEQLAAAGISEADLYLMSHTNPEKLLQ >Mature_155_residues PDILQYIAAHNLVLGTGHISPAEILTVVPAAKQLGVEKILITHAMATVPGLTLAQMQAIADQGAFLELTYVNTLMGENAT EADHQAWENVSIETMAKAIQTIGATHFVLSTDLGRALDPSPIEGYQRFLEQLAAAGISEADLYLMSHTNPEKLLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16761; Mature: 16630
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDILQYIAAHNLVLGTGHISPAEILTVVPAAKQLGVEKILITHAMATVPGLTLAQMQAI CCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ADQGAFLELTYVNTLMGENATEADHQAWENVSIETMAKAIQTIGATHFVLSTDLGRALDP HCCCCEEEEHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCC SPIEGYQRFLEQLAAAGISEADLYLMSHTNPEKLLQ CCHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHCC >Mature Secondary Structure PDILQYIAAHNLVLGTGHISPAEILTVVPAAKQLGVEKILITHAMATVPGLTLAQMQAI CHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ADQGAFLELTYVNTLMGENATEADHQAWENVSIETMAKAIQTIGATHFVLSTDLGRALDP HCCCCEEEEHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCC SPIEGYQRFLEQLAAAGISEADLYLMSHTNPEKLLQ CCHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA