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The map label for this gene is atpB

Identifier: 170077362

GI number: 170077362

Start: 768551

End: 769285

Strand: Reverse

Name: atpB

Synonym: SYNPCC7002_A0739

Alternate gene names: 170077362

Gene position: 769285-768551 (Counterclockwise)

Preceding gene: 170077363

Following gene: 170077361

Centisome position: 25.57

GC content: 46.39

Gene sequence:

>735_bases
ATGCTTAATAGTTTAACTACATTTAGTTTATTTCCCCTTGCTGAACTCGAAGTCGGCAAACATTTTTATTGGGAACTCGG
TGGCTTAAAAGTTCACGGACAGGTACTAATGACCTCTTGGTTCGTTATTGCTGTACTCGTGCTTGCTTCGATCCTAGCAA
CCCGTAATGTTCAGCGTGTCCCTGGTGGTTTCCAAAACTTCATGGAATACGCCCTCGAATTTATTCGGGATCTGGCTAAA
AACCAGCTAGGCGAAAAAGAATATCGTCCTTGGGTGCCCTTCATTGGAACATTGTTCCTCTTCATCTTCATTGCCAACTG
GTCCGGTGCCCTTGTGCCTTGGAAAATCATTGGTTTACCCGAAGGTGAATTGGCCGCTCCCACTAACGACATTAACACCA
CCGTAGCCCTAGCTCTGTTGACTTCCTTGGCATACTTTTATGCCGGGTTCAAAAAGCGTGGAATTGGTTACCTGAAAAAA
TATTTGGAACCAACCCCTATCCTGCTTCCAATTAACATTCTGGAAGATTTCACCAAGCCCCTCTCCCTGAGCTTCCGTCT
TTTCGGAAACATCCTCGCGGACGAACTGGTGGTTGGTGTACTGGTTTTCTTGGTTCCCCTGATTATTCCTTTACCCTTGA
TGGCACTCGGTTTATTTGCCAGTGCGATCCAAGCGTTGATTTTTGCGACCCTCGCCGCAGCCTACATTGCTGAAGCGATG
GAAGGTCATCACTAA

Upstream 100 bases:

>100_bases
GCTGCCAAATAGTTTACTTATCGCAGACAAAACAAATTAGAATTCCGCCCTAGCCCTTGATTGTCGAAAGAAAGAACCGG
GGAAAGATCATCAAATGGAA

Downstream 100 bases:

>100_bases
GGGAAGGTTTGACTTCAGGATTATTGATAAAAGCCCGAAGGCTAGCTAGAAATTTCAACTTGATTTGTGTTTCTGGTCAC
TTTTTCTGTTAATTTTTTTG

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a 1; F-ATPase subunit 6 1

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLNSLTTFSLFPLAELEVGKHFYWELGGLKVHGQVLMTSWFVIAVLVLASILATRNVQRVPGGFQNFMEYALEFIRDLAK
NQLGEKEYRPWVPFIGTLFLFIFIANWSGALVPWKIIGLPEGELAAPTNDINTTVALALLTSLAYFYAGFKKRGIGYLKK
YLEPTPILLPINILEDFTKPLSLSFRLFGNILADELVVGVLVFLVPLIIPLPLMALGLFASAIQALIFATLAAAYIAEAM
EGHH

Sequences:

>Translated_244_residues
MLNSLTTFSLFPLAELEVGKHFYWELGGLKVHGQVLMTSWFVIAVLVLASILATRNVQRVPGGFQNFMEYALEFIRDLAK
NQLGEKEYRPWVPFIGTLFLFIFIANWSGALVPWKIIGLPEGELAAPTNDINTTVALALLTSLAYFYAGFKKRGIGYLKK
YLEPTPILLPINILEDFTKPLSLSFRLFGNILADELVVGVLVFLVPLIIPLPLMALGLFASAIQALIFATLAAAYIAEAM
EGHH
>Mature_244_residues
MLNSLTTFSLFPLAELEVGKHFYWELGGLKVHGQVLMTSWFVIAVLVLASILATRNVQRVPGGFQNFMEYALEFIRDLAK
NQLGEKEYRPWVPFIGTLFLFIFIANWSGALVPWKIIGLPEGELAAPTNDINTTVALALLTSLAYFYAGFKKRGIGYLKK
YLEPTPILLPINILEDFTKPLSLSFRLFGNILADELVVGVLVFLVPLIIPLPLMALGLFASAIQALIFATLAAAYIAEAM
EGHH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family

Homologues:

Organism=Escherichia coli, GI1790176, Length=211, Percent_Identity=28.436018957346, Blast_Score=74, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6226527, Length=272, Percent_Identity=27.5735294117647, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATP61_SYNP2 (B1XHZ3)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734000.1
- ProteinModelPortal:   B1XHZ3
- SMR:   B1XHZ3
- GeneID:   6057135
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0739
- HOGENOM:   HBG734175
- OMA:   PIEIIGH
- ProtClustDB:   PRK05815
- HAMAP:   MF_01393
- InterPro:   IPR000568
- InterPro:   IPR023011
- Gene3D:   G3DSA:1.20.120.220
- PANTHER:   PTHR11410
- PRINTS:   PR00123
- TIGRFAMs:   TIGR01131

Pfam domain/function: PF00119 ATP-synt_A; SSF81336 ATPase_F0_A

EC number: 3.6.3.14

Molecular weight: Translated: 27059; Mature: 27059

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b5d388c)-; HASH(0x1b5ced68)-; HASH(0x1a893428)-; HASH(0x1b5d7940)-; HASH(0x1b5ceccc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSLTTFSLFPLAELEVGKHFYWELGGLKVHGQVLMTSWFVIAVLVLASILATRNVQRV
CCCCCCHHHHCCHHHHHHCCHHHEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
PGGFQNFMEYALEFIRDLAKNQLGEKEYRPWVPFIGTLFLFIFIANWSGALVPWKIIGLP
CCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC
EGELAAPTNDINTTVALALLTSLAYFYAGFKKRGIGYLKKYLEPTPILLPINILEDFTKP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEHHHHHHCCHH
LSLSFRLFGNILADELVVGVLVFLVPLIIPLPLMALGLFASAIQALIFATLAAAYIAEAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGHH
CCCH
>Mature Secondary Structure
MLNSLTTFSLFPLAELEVGKHFYWELGGLKVHGQVLMTSWFVIAVLVLASILATRNVQRV
CCCCCCHHHHCCHHHHHHCCHHHEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
PGGFQNFMEYALEFIRDLAKNQLGEKEYRPWVPFIGTLFLFIFIANWSGALVPWKIIGLP
CCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC
EGELAAPTNDINTTVALALLTSLAYFYAGFKKRGIGYLKKYLEPTPILLPINILEDFTKP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEHHHHHHCCHH
LSLSFRLFGNILADELVVGVLVFLVPLIIPLPLMALGLFASAIQALIFATLAAAYIAEAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGHH
CCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA