Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 170077359

GI number: 170077359

Start: 766851

End: 767378

Strand: Reverse

Name: atpF

Synonym: SYNPCC7002_A0736

Alternate gene names: 170077359

Gene position: 767378-766851 (Counterclockwise)

Preceding gene: 170077360

Following gene: 170077358

Centisome position: 25.51

GC content: 46.97

Gene sequence:

>528_bases
ATGGGAATTATTTCCTACCTTGCCACCGCATCGGAGGGTGGTTTTCATTTAAACTTCGACATTTTAGAAACAAACATTAT
CAACCTTGCGATCATCATTGGGGTTCTGTACGTCTATGGGAGCAAGTTTATTGGCAATATTTTAGAGACGCGCAAAAGCA
AAATTGTCGCCGATCTAGAAGACGCTGAAAACCGCGCGAAAAAAGCCCAAGAAGCACTGACAAAAGCCCAGAAAGATCTC
GAACAGGCCCAGGCCCAGGCTGCCAAGATTCGGGAAGACGCTAAGGTTGCCGCAGAAAAAACCAAACAAGACATCTTGGC
CAAAGGTCGCGATGAAGTTGAAAAACTCAAGGCCTCTGCGGTTAAAGAATTAAGCACAGAACAAGCGAAAGTAATCACCG
AGCTGAAGCGACGGGTTGCAGAACTTGCTCTGGCAAAAGTGGAAGCTCAATTGCGGTCTGATTTGGATGAGTCTGCTCAA
GCCAAGTTAGTTGATCGCAGCATTGCACAACTGGGAGGTGGCGCATGA

Upstream 100 bases:

>100_bases
AACTCTTGAAGATTTCAAGTTTTTATATCTTTAAGAAAAAGAGTTATCCATTTTTAGATGTATACACCATAAGCAAATAG
CGCTGGGGTAGATCGATATC

Downstream 100 bases:

>100_bases
AAGGCAACACAATGATTGCTCAGGTCGTTGAGCCCTATGCTGGTGCCCTGATGACCCTTGCGCAAGAGACCAATAAAGTC
GAGGCATTTGCAGAAAATTG

Product: ATP synthase B chain (subunit I)

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b 1; ATPase subunit I 1; F-type ATPase subunit b 1; F-ATPase subunit b 1

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MGIISYLATASEGGFHLNFDILETNIINLAIIIGVLYVYGSKFIGNILETRKSKIVADLEDAENRAKKAQEALTKAQKDL
EQAQAQAAKIREDAKVAAEKTKQDILAKGRDEVEKLKASAVKELSTEQAKVITELKRRVAELALAKVEAQLRSDLDESAQ
AKLVDRSIAQLGGGA

Sequences:

>Translated_175_residues
MGIISYLATASEGGFHLNFDILETNIINLAIIIGVLYVYGSKFIGNILETRKSKIVADLEDAENRAKKAQEALTKAQKDL
EQAQAQAAKIREDAKVAAEKTKQDILAKGRDEVEKLKASAVKELSTEQAKVITELKRRVAELALAKVEAQLRSDLDESAQ
AKLVDRSIAQLGGGA
>Mature_174_residues
GIISYLATASEGGFHLNFDILETNIINLAIIIGVLYVYGSKFIGNILETRKSKIVADLEDAENRAKKAQEALTKAQKDLE
QAQAQAAKIREDAKVAAEKTKQDILAKGRDEVEKLKASAVKELSTEQAKVITELKRRVAELALAKVEAQLRSDLDESAQA
KLVDRSIAQLGGGA

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF1_SYNP2 (B1XHZ0)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001733997.1
- GeneID:   6057206
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0736
- HOGENOM:   HBG708990
- OMA:   WGNFAFR
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18991; Mature: 18860

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x18abfdd4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIISYLATASEGGFHLNFDILETNIINLAIIIGVLYVYGSKFIGNILETRKSKIVADLE
CCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAENRAKKAQEALTKAQKDLEQAQAQAAKIREDAKVAAEKTKQDILAKGRDEVEKLKASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VKELSTEQAKVITELKRRVAELALAKVEAQLRSDLDESAQAKLVDRSIAQLGGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
GIISYLATASEGGFHLNFDILETNIINLAIIIGVLYVYGSKFIGNILETRKSKIVADLE
CHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAENRAKKAQEALTKAQKDLEQAQAQAAKIREDAKVAAEKTKQDILAKGRDEVEKLKASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VKELSTEQAKVITELKRRVAELALAKVEAQLRSDLDESAQAKLVDRSIAQLGGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA