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The map label for this gene is thf1

Identifier: 170077355

GI number: 170077355

Start: 762580

End: 763344

Strand: Reverse

Name: thf1

Synonym: SYNPCC7002_A0732

Alternate gene names: 170077355

Gene position: 763344-762580 (Counterclockwise)

Preceding gene: 170077356

Following gene: 170077353

Centisome position: 25.38

GC content: 47.84

Gene sequence:

>765_bases
GTGAGTCAAGTTCGCACCGTTTCCGATACGAAGCGTGATTTTTATACACACCATACTCGGCCAATTAATTCGATTTTTCG
GCGCGTCGTCGAAGAACTTTTGGTCGAAATGCATTTACTGTCGGTAAACGCCGATTTTCGCTACGATCCTTTCTATGCGC
TGGGCGTCGTCACTTCCTTTGAGCGCTTTATGCAAGGCTATCGCCCAGAGGCGGATAAAGTTTCTATTTTCCAAAGCATG
TGCCAAGCGATTGGGGGCGACGCCAACCGTTACAAAGAAGATGCAATGGCCCTGGTTGAACTGGCAAAACGTTGTTCTGG
GACGCAACTAATTGAGTGCTTCCGGCAAGATGTTCCCCCCGAAGGTGCCCAGGAATTATGGGAAAAAATTGAGGCGATCG
CCAAAAATGATCACTTCAAATATAGTCGGTTGTTTGCCATTGGCGTCTATACTTTTTTGGGTGAATCAGAGCCACAACTC
CTTGAGGACACCGAGAAGCGCGATGAAATGCTGACCACGGTCACCGCAGGTCTGAATCTCCCTGAGGAGAAAATGAAAAA
AGACTTAGATCTTTATCGCAGCAATCTCGAAAAAATGAATCAAGTTCTAGAGGTTTTAGAAGATGCCCTCGCCGTAGAAC
GGCAACGTCGAGAAAAGGCAGAAGCAGAGGCGAAGGCCAAAACAGCAGAAGCCACCGTAGCGACTGAAACCAACGACGAA
CAAGACGAACAAAAAGAAACCAGTGAATCCGGCTCCGATGCTTAG

Upstream 100 bases:

>100_bases
ATATTGAGCCGTCAAGAATCCGTCCCAGACCCATCACCTTGGCAAACGCCTCTGGAAACGTCAAAATAGAATATTGAAAT
GTCAATTGTGGGTTCCATTT

Downstream 100 bases:

>100_bases
GATTACTTGTGCGAAACCTTGATTCTTAAATGTTATTTACTAACACCTTGATCTTCAGGATTTTTGATTGCCTTTGTGGG
GTAAAAACTGCAGATCAAGG

Product: Thf1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSFERFMQGYRPEADKVSIFQSM
CQAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPPEGAQELWEKIEAIAKNDHFKYSRLFAIGVYTFLGESEPQL
LEDTEKRDEMLTTVTAGLNLPEEKMKKDLDLYRSNLEKMNQVLEVLEDALAVERQRREKAEAEAKAKTAEATVATETNDE
QDEQKETSESGSDA

Sequences:

>Translated_254_residues
MSQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSFERFMQGYRPEADKVSIFQSM
CQAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPPEGAQELWEKIEAIAKNDHFKYSRLFAIGVYTFLGESEPQL
LEDTEKRDEMLTTVTAGLNLPEEKMKKDLDLYRSNLEKMNQVLEVLEDALAVERQRREKAEAEAKAKTAEATVATETNDE
QDEQKETSESGSDA
>Mature_253_residues
SQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSFERFMQGYRPEADKVSIFQSMC
QAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPPEGAQELWEKIEAIAKNDHFKYSRLFAIGVYTFLGESEPQLL
EDTEKRDEMLTTVTAGLNLPEEKMKKDLDLYRSNLEKMNQVLEVLEDALAVERQRREKAEAEAKAKTAEATVATETNDEQ
DEQKETSESGSDA

Specific function: May be involved in photosynthetic membrane biogenesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THF1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): THF1_SYNP2 (B1XHY6)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001733993.1
- GeneID:   6057226
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0732
- HOGENOM:   HBG634536
- OMA:   RTVSDTK
- ProtClustDB:   PRK13266
- HAMAP:   MF_01843
- InterPro:   IPR017499
- TIGRFAMs:   TIGR03060

Pfam domain/function: PF11264 ThylakoidFormat

EC number: NA

Molecular weight: Translated: 29083; Mature: 28952

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSF
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ERFMQGYRPEADKVSIFQSMCQAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPP
HHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
EGAQELWEKIEAIAKNDHFKYSRLFAIGVYTFLGESEPQLLEDTEKRDEMLTTVTAGLNL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PEEKMKKDLDLYRSNLEKMNQVLEVLEDALAVERQRREKAEAEAKAKTAEATVATETNDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
QDEQKETSESGSDA
HHHHHHHHCCCCCC
>Mature Secondary Structure 
SQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSF
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ERFMQGYRPEADKVSIFQSMCQAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPP
HHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
EGAQELWEKIEAIAKNDHFKYSRLFAIGVYTFLGESEPQLLEDTEKRDEMLTTVTAGLNL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PEEKMKKDLDLYRSNLEKMNQVLEVLEDALAVERQRREKAEAEAKAKTAEATVATETNDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
QDEQKETSESGSDA
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA