Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077324

Identifier: 170077324

GI number: 170077324

Start: 731304

End: 732380

Strand: Reverse

Name: 170077324

Synonym: SYNPCC7002_A0701

Alternate gene names: NA

Gene position: 732380-731304 (Counterclockwise)

Preceding gene: 170077325

Following gene: 170077321

Centisome position: 24.35

GC content: 50.79

Gene sequence:

>1077_bases
ATGCGTCCTGTTTTGTATTTGGCGATTACGAGTCATGGGTTTGGCCATGTGGTGCGGGTGGCTTCGGTGGCGGCCCAGGT
GCAGAAATTACTGCCCGATGTATTGCTGATTTTTGTGACGACAGCGCCCCACTGGTTGATTCGCAGTTATGTCAAAGGAG
ATTTTATTCAGCGGCCGAAACGGTTGGACGTGGGGGTGATTCAGGCGGACAGTTTCTCCATGGACTACGACGCAACCCTA
GAAAAATTGCGGGAAATTCGCCGGCGATCGCCCCGGATTATTGCGGGCGAAGTGGACTTTTTACGGTTAAATCGTGCCCA
GTTAGTCCTCGCTGATTTGCCGCCCCTGGCGATTCCCATTGCCCATGGTGCCGAGATTCCCTGTTGGTGTATGGGAAATT
TTGGTTGGGATTTTATTTACCGTGCTTGGGGTGGAGAATTTATTCCCGAAGCCGATTGGATTACAGAGCCTTATCGTGAA
GGCGATCGCCTGTTTCGTTTACCGCTGCACGAACCCATGGGGAATTTTGCAAACGTTACCGATGTGGGACTGACGGGCGG
CGATCCGCAATATGATCTGGCAGCCCTGCGGGAAAAATTTCAATTAACTCATCCCAAGGAAAAAACTATTCTTCTCAGTT
TTGGCGGCCTCGGTTTTGCCGGAATGCCCTATGAAGCCTTGGCGCAATTTCCTGATTATCAATTTATTAGCTTCGACCGT
AACGCCCCCGATTTAGCAAATCTCCGCAAAATTACAGAGACCCAATACCGCCCCGTTGACTTCATGCCCCTGTGCGATCG
CATTATTTCCAAACCGGGCTTTAGTACCTACGCCGAAGCCCTGCGCCTCGATCTTCCCGTTGTGACCTTGCCTAGGGATG
ATTTTGCCGAAGGGCCAATTTTAATTAAAAACCTCCAACAATATGGCCACCACCAAATTTTAGATCCAGAGCAATTTGCC
CAGGGTGATTGGGATTTTCTCCGGGAATCACCCCAACCGCCCCAAGGCAATCAACCCATCGATAAGACGGGCACAAAGGC
GATCGCCCAAGCCATTGCCGAATTTCTCAGCCATTAA

Upstream 100 bases:

>100_bases
TCAGGGAAAAAATCTCACAAATGATCAGCTTCAGACTTCCCTAAAGGGTTTAACCCAGCCCCCCATGGTCTAATAGTTTT
CAACGATTGCGGAAGGTTCT

Downstream 100 bases:

>100_bases
TTTCCCGTAACAAAAACCTCAGGTACAGACTCCGGTTCAGGAAACGGTGATTCCCCCAGGACAAAGGGGAGATGCGCCCC
CGTAAGTCCCTTAATAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPKRLDVGVIQADSFSMDYDATL
EKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPIAHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYRE
GDRLFRLPLHEPMGNFANVTDVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR
NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPILIKNLQQYGHHQILDPEQFA
QGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH

Sequences:

>Translated_358_residues
MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPKRLDVGVIQADSFSMDYDATL
EKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPIAHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYRE
GDRLFRLPLHEPMGNFANVTDVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR
NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPILIKNLQQYGHHQILDPEQFA
QGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH
>Mature_358_residues
MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPKRLDVGVIQADSFSMDYDATL
EKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPIAHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYRE
GDRLFRLPLHEPMGNFANVTDVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR
NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPILIKNLQQYGHHQILDPEQFA
QGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40484; Mature: 40484

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPK
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCC
RLDVGVIQADSFSMDYDATLEKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPI
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEECCCEEEEECCCCCEEEE
AHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYREGDRLFRLPLHEPMGNFANVT
CCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCE
DVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR
ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCEEEEECC
NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPI
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCH
LIKNLQQYGHHQILDPEQFAQGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH
HHHHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPK
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCC
RLDVGVIQADSFSMDYDATLEKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPI
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEECCCEEEEECCCCCEEEE
AHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYREGDRLFRLPLHEPMGNFANVT
CCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCE
DVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR
ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCEEEEECC
NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPI
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCH
LIKNLQQYGHHQILDPEQFAQGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH
HHHHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA