| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077324
Identifier: 170077324
GI number: 170077324
Start: 731304
End: 732380
Strand: Reverse
Name: 170077324
Synonym: SYNPCC7002_A0701
Alternate gene names: NA
Gene position: 732380-731304 (Counterclockwise)
Preceding gene: 170077325
Following gene: 170077321
Centisome position: 24.35
GC content: 50.79
Gene sequence:
>1077_bases ATGCGTCCTGTTTTGTATTTGGCGATTACGAGTCATGGGTTTGGCCATGTGGTGCGGGTGGCTTCGGTGGCGGCCCAGGT GCAGAAATTACTGCCCGATGTATTGCTGATTTTTGTGACGACAGCGCCCCACTGGTTGATTCGCAGTTATGTCAAAGGAG ATTTTATTCAGCGGCCGAAACGGTTGGACGTGGGGGTGATTCAGGCGGACAGTTTCTCCATGGACTACGACGCAACCCTA GAAAAATTGCGGGAAATTCGCCGGCGATCGCCCCGGATTATTGCGGGCGAAGTGGACTTTTTACGGTTAAATCGTGCCCA GTTAGTCCTCGCTGATTTGCCGCCCCTGGCGATTCCCATTGCCCATGGTGCCGAGATTCCCTGTTGGTGTATGGGAAATT TTGGTTGGGATTTTATTTACCGTGCTTGGGGTGGAGAATTTATTCCCGAAGCCGATTGGATTACAGAGCCTTATCGTGAA GGCGATCGCCTGTTTCGTTTACCGCTGCACGAACCCATGGGGAATTTTGCAAACGTTACCGATGTGGGACTGACGGGCGG CGATCCGCAATATGATCTGGCAGCCCTGCGGGAAAAATTTCAATTAACTCATCCCAAGGAAAAAACTATTCTTCTCAGTT TTGGCGGCCTCGGTTTTGCCGGAATGCCCTATGAAGCCTTGGCGCAATTTCCTGATTATCAATTTATTAGCTTCGACCGT AACGCCCCCGATTTAGCAAATCTCCGCAAAATTACAGAGACCCAATACCGCCCCGTTGACTTCATGCCCCTGTGCGATCG CATTATTTCCAAACCGGGCTTTAGTACCTACGCCGAAGCCCTGCGCCTCGATCTTCCCGTTGTGACCTTGCCTAGGGATG ATTTTGCCGAAGGGCCAATTTTAATTAAAAACCTCCAACAATATGGCCACCACCAAATTTTAGATCCAGAGCAATTTGCC CAGGGTGATTGGGATTTTCTCCGGGAATCACCCCAACCGCCCCAAGGCAATCAACCCATCGATAAGACGGGCACAAAGGC GATCGCCCAAGCCATTGCCGAATTTCTCAGCCATTAA
Upstream 100 bases:
>100_bases TCAGGGAAAAAATCTCACAAATGATCAGCTTCAGACTTCCCTAAAGGGTTTAACCCAGCCCCCCATGGTCTAATAGTTTT CAACGATTGCGGAAGGTTCT
Downstream 100 bases:
>100_bases TTTCCCGTAACAAAAACCTCAGGTACAGACTCCGGTTCAGGAAACGGTGATTCCCCCAGGACAAAGGGGAGATGCGCCCC CGTAAGTCCCTTAATAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPKRLDVGVIQADSFSMDYDATL EKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPIAHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYRE GDRLFRLPLHEPMGNFANVTDVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPILIKNLQQYGHHQILDPEQFA QGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH
Sequences:
>Translated_358_residues MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPKRLDVGVIQADSFSMDYDATL EKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPIAHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYRE GDRLFRLPLHEPMGNFANVTDVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPILIKNLQQYGHHQILDPEQFA QGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH >Mature_358_residues MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPKRLDVGVIQADSFSMDYDATL EKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPIAHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYRE GDRLFRLPLHEPMGNFANVTDVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPILIKNLQQYGHHQILDPEQFA QGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40484; Mature: 40484
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPK CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCC RLDVGVIQADSFSMDYDATLEKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPI CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEECCCEEEEECCCCCEEEE AHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYREGDRLFRLPLHEPMGNFANVT CCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCE DVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCEEEEECC NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPI CCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCH LIKNLQQYGHHQILDPEQFAQGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH HHHHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPVLYLAITSHGFGHVVRVASVAAQVQKLLPDVLLIFVTTAPHWLIRSYVKGDFIQRPK CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCC RLDVGVIQADSFSMDYDATLEKLREIRRRSPRIIAGEVDFLRLNRAQLVLADLPPLAIPI CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEECCCEEEEECCCCCEEEE AHGAEIPCWCMGNFGWDFIYRAWGGEFIPEADWITEPYREGDRLFRLPLHEPMGNFANVT CCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCE DVGLTGGDPQYDLAALREKFQLTHPKEKTILLSFGGLGFAGMPYEALAQFPDYQFISFDR ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCEEEEECC NAPDLANLRKITETQYRPVDFMPLCDRIISKPGFSTYAEALRLDLPVVTLPRDDFAEGPI CCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCH LIKNLQQYGHHQILDPEQFAQGDWDFLRESPQPPQGNQPIDKTGTKAIAQAIAEFLSH HHHHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA