| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is pdxA [H]
Identifier: 170077294
GI number: 170077294
Start: 701132
End: 702208
Strand: Reverse
Name: pdxA [H]
Synonym: SYNPCC7002_A0671
Alternate gene names: 170077294
Gene position: 702208-701132 (Counterclockwise)
Preceding gene: 170077295
Following gene: 170077292
Centisome position: 23.34
GC content: 52.46
Gene sequence:
>1077_bases ATGAAAATTCGCCTCGCTTTGACTATTGGTGATCCGGCCGGGATTGGCCCAGAGGTACTTTTAAAAGCTCTGGCGGATCC AGAAATTAGAGCGCTTTGTCCGATGAGGGTCATTGGCGATCGCCCCTTGCTCGAAAAAACCTATCAGCACCTCAAAACTC GGACGGAATCTGATCTCCTTGATCCCAGTGAGTTAGAGATTGTCGAACCGAGTGGCAATGAATTTTTGAGGAATTTCACC TGGGGAGAAGGTTCGGCAGAAACAGGCGATCGCGCTTTCCAGTACCTCAACACGGCGATTGAAAAAACCCTGGGGGGAGA ATTTTCGGGGATTGTCACCGCCCCCATTGCTAAATCCCTCTGGAAAGCAGCCGGCCACGACTACCCCGGCCAAACGGAGG TTCTCGCCCAAAAGAGCCAAACCACCCGCTATGGCATGGCCTTTATTGGCAAATCTCCCTATACAGGCTGGACATTGCGG AGCCTGCTAGCGACGACCCACATTCCTCTAAAAGCGGTGCCAGAAACCTTGAATCCAGGGCTGATGGATTTGAAACTTAG TCTTCTTTTAGAGTCGCTCCAGCAGGATTTTGGGTTAGAAAATCCCCAGGTGGCGATCGCCGGTTTAAATCCCCACAGTG GCGAAAATGGTCAATTGGGCACCGAAGAAATGGACTGGCTTAACGGTTGGCTAGAAGATGCGCGACAAAAATATCCCAAT GCAACTCTGTTAGGGCTTTATCCTCCGGATACCATGTGGGTCAATGCGGGCAAAGCTTGGTATGGCAAACCAGAATTCAA ACCCGCCGCCGATGCGTATCTGGCTCTCTACCACGACCAAGGGTTAATCCCAGTGAAACTGATGGCCTTTGACTACGCGA TCAATACCACCATTGGTTTACCCTTTATTCGGACTTCCCCCGACCACGGCACCGCCTTCGACATTGCGGGGCAAGGCAGC GCCAATCCCACCAGCATGAAAGAAGCGATCAAACTGGCCGTCAGCATTAGCCAAAATCGCGCCGCCACCACTGTCCCCCC ACTTCTAACCCCCCCAGATCGCTCGTTGCTTGGATGA
Upstream 100 bases:
>100_bases CCTGAAGTTTGAACCGAAGGCTGAGTAGACGCCCTCACACCCTCCGCCTTCGGCACCTCCCTCCAGGGAGGATTTTTTAG TTCGTTGACTATTCTCCCCT
Downstream 100 bases:
>100_bases GGGGCGTTTTGTCCGGGGCGAATAGTTCAAGGGAAATTTGGCCCCGCAGGGTATCCTGACAACAAAACCGTAGGCCCGTG TGGGTCGGTGCTCGCAGGGG
Product: 4-hydroxythreonine-4-phosphate dehydrogenase
Products: NA
Alternate protein names: 4-(phosphohydroxy)-L-threonine dehydrogenase [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKIRLALTIGDPAGIGPEVLLKALADPEIRALCPMRVIGDRPLLEKTYQHLKTRTESDLLDPSELEIVEPSGNEFLRNFT WGEGSAETGDRAFQYLNTAIEKTLGGEFSGIVTAPIAKSLWKAAGHDYPGQTEVLAQKSQTTRYGMAFIGKSPYTGWTLR SLLATTHIPLKAVPETLNPGLMDLKLSLLLESLQQDFGLENPQVAIAGLNPHSGENGQLGTEEMDWLNGWLEDARQKYPN ATLLGLYPPDTMWVNAGKAWYGKPEFKPAADAYLALYHDQGLIPVKLMAFDYAINTTIGLPFIRTSPDHGTAFDIAGQGS ANPTSMKEAIKLAVSISQNRAATTVPPLLTPPDRSLLG
Sequences:
>Translated_358_residues MKIRLALTIGDPAGIGPEVLLKALADPEIRALCPMRVIGDRPLLEKTYQHLKTRTESDLLDPSELEIVEPSGNEFLRNFT WGEGSAETGDRAFQYLNTAIEKTLGGEFSGIVTAPIAKSLWKAAGHDYPGQTEVLAQKSQTTRYGMAFIGKSPYTGWTLR SLLATTHIPLKAVPETLNPGLMDLKLSLLLESLQQDFGLENPQVAIAGLNPHSGENGQLGTEEMDWLNGWLEDARQKYPN ATLLGLYPPDTMWVNAGKAWYGKPEFKPAADAYLALYHDQGLIPVKLMAFDYAINTTIGLPFIRTSPDHGTAFDIAGQGS ANPTSMKEAIKLAVSISQNRAATTVPPLLTPPDRSLLG >Mature_358_residues MKIRLALTIGDPAGIGPEVLLKALADPEIRALCPMRVIGDRPLLEKTYQHLKTRTESDLLDPSELEIVEPSGNEFLRNFT WGEGSAETGDRAFQYLNTAIEKTLGGEFSGIVTAPIAKSLWKAAGHDYPGQTEVLAQKSQTTRYGMAFIGKSPYTGWTLR SLLATTHIPLKAVPETLNPGLMDLKLSLLLESLQQDFGLENPQVAIAGLNPHSGENGQLGTEEMDWLNGWLEDARQKYPN ATLLGLYPPDTMWVNAGKAWYGKPEFKPAADAYLALYHDQGLIPVKLMAFDYAINTTIGLPFIRTSPDHGTAFDIAGQGS ANPTSMKEAIKLAVSISQNRAATTVPPLLTPPDRSLLG
Specific function: Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) [H]
COG id: COG1995
COG function: function code H; Pyridoxal phosphate biosynthesis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pdxA family [H]
Homologues:
Organism=Escherichia coli, GI1786237, Length=342, Percent_Identity=33.6257309941521, Blast_Score=179, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005255 [H]
Pfam domain/function: PF04166 PdxA [H]
EC number: =1.1.1.262 [H]
Molecular weight: Translated: 38953; Mature: 38953
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRLALTIGDPAGIGPEVLLKALADPEIRALCPMRVIGDRPLLEKTYQHLKTRTESDLL CEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHHHHHHCCHHCCC DPSELEIVEPSGNEFLRNFTWGEGSAETGDRAFQYLNTAIEKTLGGEFSGIVTAPIAKSL CCCCEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH WKAAGHDYPGQTEVLAQKSQTTRYGMAFIGKSPYTGWTLRSLLATTHIPLKAVPETLNPG HHHHCCCCCCCHHHHHHHCCCHHHCEEEECCCCCCHHHHHHHHHHCCCCHHHCCHHCCCC LMDLKLSLLLESLQQDFGLENPQVAIAGLNPHSGENGQLGTEEMDWLNGWLEDARQKYPN HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC ATLLGLYPPDTMWVNAGKAWYGKPEFKPAADAYLALYHDQGLIPVKLMAFDYAINTTIGL CEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHCCEECC PFIRTSPDHGTAFDIAGQGSANPTSMKEAIKLAVSISQNRAATTVPPLLTPPDRSLLG CEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MKIRLALTIGDPAGIGPEVLLKALADPEIRALCPMRVIGDRPLLEKTYQHLKTRTESDLL CEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHHHHHHCCHHCCC DPSELEIVEPSGNEFLRNFTWGEGSAETGDRAFQYLNTAIEKTLGGEFSGIVTAPIAKSL CCCCEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH WKAAGHDYPGQTEVLAQKSQTTRYGMAFIGKSPYTGWTLRSLLATTHIPLKAVPETLNPG HHHHCCCCCCCHHHHHHHCCCHHHCEEEECCCCCCHHHHHHHHHHCCCCHHHCCHHCCCC LMDLKLSLLLESLQQDFGLENPQVAIAGLNPHSGENGQLGTEEMDWLNGWLEDARQKYPN HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC ATLLGLYPPDTMWVNAGKAWYGKPEFKPAADAYLALYHDQGLIPVKLMAFDYAINTTIGL CEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHCCEECC PFIRTSPDHGTAFDIAGQGSANPTSMKEAIKLAVSISQNRAATTVPPLLTPPDRSLLG CEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]