| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077285
Identifier: 170077285
GI number: 170077285
Start: 692790
End: 694028
Strand: Reverse
Name: 170077285
Synonym: SYNPCC7002_A0662
Alternate gene names: NA
Gene position: 694028-692790 (Counterclockwise)
Preceding gene: 170077292
Following gene: 170077284
Centisome position: 23.07
GC content: 49.48
Gene sequence:
>1239_bases ATGCAGACCCATTACCCGGTAATAATTGTTGGGGGTGGCCAGGCAGGACTTGCCCTCAGCTATCTCCTCAAGCAAAACAA TATTGACCACCTTATTTTTGAGAAACACAAAATTGGTCATGCGTGGCGTAATGAACGCTGGAATTCCTTTTGTTTAGTGA CCCCCAATTGGCAATGTCGGCTCCCCGGTTTCCCCTATGCAGGGCCTGACCCTACTGGTTTCATGGCCAAGGAAGAGATT GTTTCTTATTTAGAAGCCTATGCCCGCTCTTTTAATCCGCCCATTCGAGAGGGGGTAACGGTTTCCAAGGTGAGTTCGGC TGGAACCAAGTTTGCAGTAAAAACATCTATCGGTAACTACACGGCTGATCAAGTGGCGATCGCCACAGGGGGATACCACG TTCCAAAAATTCCGCCCATCGCTGCCCAACTGCCGCGTGAGTTACAGCAAATCCATTCCGTACAGTACAAAAATCCCCAG GATCTTCCCGACGAAGTATTGATTGTGGGCACTGGCCAGTCGGGTTGTCAAATTGCTGAGGATCTTCATTTAGCAGGGAA AACAGTTCACCTTGTTACCGGTAGTGCGCCCCGAGCGCCGCGCCGTTATCGGGGCAAGGATGTGGTGGAGTGGCTCGAAC GCATGGGTTATTACGACCTACCCATCGACCAGCATCCCCAAAAAGAAATGGTGCGTCATAAAACCAATCACTATGTCACA GGCCGGGATGGGGGCCGCGATATTGATCTGCGCCGCTTTGCCCAACAGGGAATGCACCTCTATGGTCGCTTGCAAAGTAT TACCAGGCAGACTCTCCACTTTGGGAAAGATTTAAAACACAATTTAGATCAGGCTGATGCCACCGTGGTGCGCATTCAAC GGAATATTGACAAATTCATTGCTGATAACAACATCACCGCTCCCCCAGAGGCCCATTATCAACCCGTCTGGGAGCCAGAA TTAGAACCATCATCCCTCAACCTCAAAGAAACTAATATTGGTGCAGTTATTTGGGCGACGGGCTTTCGCTTAAACTTTAG TTGGATTGATCTCCCCATCTTTAATGAATTGGGAGAACCCTTACATGACCGAGGGGTAACCGCCGTGGATGGATTATATT TCCTTGGTTTGCCCTGGCTCTATACCTGGGGTTCTGGTCGTTTTTCCGGTGTCGCTCGTGATGCAGAATATTTGGCGACA CAAATTACAGCAAGGCTTTTGGTTCCGGCTTCTGCTTAA
Upstream 100 bases:
>100_bases CTATGGGTAATCACAAACCGCTGGGATCGGTAACAACCCTTACAAGAAAAAGAATTGAGCGGGTTTACAGTTAAAGCAAA TCCACTTAAGAGCAACGGCA
Downstream 100 bases:
>100_bases CAACCGAACGAACGATTATTAATCCGGTTTCAGTTGAAAGACGTTCATTAGGAATTCTAAACTTCCTCAATCAAATAAAA ACCGAGTTCCTGACTTAGTG
Product: potassium transporter, Trk family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MQTHYPVIIVGGGQAGLALSYLLKQNNIDHLIFEKHKIGHAWRNERWNSFCLVTPNWQCRLPGFPYAGPDPTGFMAKEEI VSYLEAYARSFNPPIREGVTVSKVSSAGTKFAVKTSIGNYTADQVAIATGGYHVPKIPPIAAQLPRELQQIHSVQYKNPQ DLPDEVLIVGTGQSGCQIAEDLHLAGKTVHLVTGSAPRAPRRYRGKDVVEWLERMGYYDLPIDQHPQKEMVRHKTNHYVT GRDGGRDIDLRRFAQQGMHLYGRLQSITRQTLHFGKDLKHNLDQADATVVRIQRNIDKFIADNNITAPPEAHYQPVWEPE LEPSSLNLKETNIGAVIWATGFRLNFSWIDLPIFNELGEPLHDRGVTAVDGLYFLGLPWLYTWGSGRFSGVARDAEYLAT QITARLLVPASA
Sequences:
>Translated_412_residues MQTHYPVIIVGGGQAGLALSYLLKQNNIDHLIFEKHKIGHAWRNERWNSFCLVTPNWQCRLPGFPYAGPDPTGFMAKEEI VSYLEAYARSFNPPIREGVTVSKVSSAGTKFAVKTSIGNYTADQVAIATGGYHVPKIPPIAAQLPRELQQIHSVQYKNPQ DLPDEVLIVGTGQSGCQIAEDLHLAGKTVHLVTGSAPRAPRRYRGKDVVEWLERMGYYDLPIDQHPQKEMVRHKTNHYVT GRDGGRDIDLRRFAQQGMHLYGRLQSITRQTLHFGKDLKHNLDQADATVVRIQRNIDKFIADNNITAPPEAHYQPVWEPE LEPSSLNLKETNIGAVIWATGFRLNFSWIDLPIFNELGEPLHDRGVTAVDGLYFLGLPWLYTWGSGRFSGVARDAEYLAT QITARLLVPASA >Mature_412_residues MQTHYPVIIVGGGQAGLALSYLLKQNNIDHLIFEKHKIGHAWRNERWNSFCLVTPNWQCRLPGFPYAGPDPTGFMAKEEI VSYLEAYARSFNPPIREGVTVSKVSSAGTKFAVKTSIGNYTADQVAIATGGYHVPKIPPIAAQLPRELQQIHSVQYKNPQ DLPDEVLIVGTGQSGCQIAEDLHLAGKTVHLVTGSAPRAPRRYRGKDVVEWLERMGYYDLPIDQHPQKEMVRHKTNHYVT GRDGGRDIDLRRFAQQGMHLYGRLQSITRQTLHFGKDLKHNLDQADATVVRIQRNIDKFIADNNITAPPEAHYQPVWEPE LEPSSLNLKETNIGAVIWATGFRLNFSWIDLPIFNELGEPLHDRGVTAVDGLYFLGLPWLYTWGSGRFSGVARDAEYLAT QITARLLVPASA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 46193; Mature: 46193
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTHYPVIIVGGGQAGLALSYLLKQNNIDHLIFEKHKIGHAWRNERWNSFCLVTPNWQCR CCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEHHHHHCCHHHCCCCCEEEEECCCCEEE LPGFPYAGPDPTGFMAKEEIVSYLEAYARSFNPPIREGVTVSKVSSAGTKFAVKTSIGNY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCEEEEEECCCCC TADQVAIATGGYHVPKIPPIAAQLPRELQQIHSVQYKNPQDLPDEVLIVGTGQSGCQIAE CCCEEEEEECCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHH DLHLAGKTVHLVTGSAPRAPRRYRGKDVVEWLERMGYYDLPIDQHPQKEMVRHKTNHYVT HHHHCCCEEEEEECCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEE GRDGGRDIDLRRFAQQGMHLYGRLQSITRQTLHFGKDLKHNLDQADATVVRIQRNIDKFI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHH ADNNITAPPEAHYQPVWEPELEPSSLNLKETNIGAVIWATGFRLNFSWIDLPIFNELGEP CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECEEEEEEEECCHHHHHCCCC LHDRGVTAVDGLYFLGLPWLYTWGSGRFSGVARDAEYLATQITARLLVPASA HHHCCCCHHCCHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCC >Mature Secondary Structure MQTHYPVIIVGGGQAGLALSYLLKQNNIDHLIFEKHKIGHAWRNERWNSFCLVTPNWQCR CCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEHHHHHCCHHHCCCCCEEEEECCCCEEE LPGFPYAGPDPTGFMAKEEIVSYLEAYARSFNPPIREGVTVSKVSSAGTKFAVKTSIGNY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCEEEEEECCCCC TADQVAIATGGYHVPKIPPIAAQLPRELQQIHSVQYKNPQDLPDEVLIVGTGQSGCQIAE CCCEEEEEECCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHH DLHLAGKTVHLVTGSAPRAPRRYRGKDVVEWLERMGYYDLPIDQHPQKEMVRHKTNHYVT HHHHCCCEEEEEECCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEE GRDGGRDIDLRRFAQQGMHLYGRLQSITRQTLHFGKDLKHNLDQADATVVRIQRNIDKFI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHH ADNNITAPPEAHYQPVWEPELEPSSLNLKETNIGAVIWATGFRLNFSWIDLPIFNELGEP CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECEEEEEEEECCHHHHHCCCC LHDRGVTAVDGLYFLGLPWLYTWGSGRFSGVARDAEYLATQITARLLVPASA HHHCCCCHHCCHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA