| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026446
Identifier: 170026446
GI number: 170026446
Start: 4682003
End: 4682623
Strand: Direct
Name: 170026446
Synonym: YPK_4242
Alternate gene names: NA
Gene position: 4682003-4682623 (Clockwise)
Preceding gene: 170026445
Following gene: 170026447
Centisome position: 99.84
GC content: 35.27
Gene sequence:
>621_bases ATGGCAAGAGAAATTTACGATCCAAGTTGGACAGGTGCAATGGGGGATTTCCTGAATGGCAACACAAAAATAAACCAATT GAAACCTCAGCATGAATTTTTTGATTCCATAGGCTTGGAAAAAATATTACGTAATGAGAAACAATATCATGTTGTACTAA CAACAGCAGAAGCAAACGATATAATTGACGACATAACAAATAGAACCCAAAAAAAGATGGGTGTAAGTACACCAGAATCA TTTGCTAGAGGAGTTGGTGAACAAATTACATCTATGGAAGCGTTTTCAAGAGGAATTGATATAAATGACCCCTTCGCACC TATATTTAAAGTTACAGATCCAACGTCAACTTACGCAGGAAATATACATGATGTCAGAGGGTTATATAACGTTATTATGG AGTTTAAGAAAATAGGAATAAAAGCCACAATATTTATTGGTGATAACGGAACTAAGTTCGTTAAGATTTCAGGCTATGCA GGACTTAGAAAAATAATTACGGGTACACGATACCTAACCACTAACCCTCAAATATTAGAAATGGGTATTGGCCTAAGAGG CATAGCTTCAGGGATTATTCGTGGAGCAAAGTTTTGTATTATTTTTTTCTATCGGATATAG
Upstream 100 bases:
>100_bases TATTTATAATCGTGCCGAATTTTTTCCGAATTCCAAGCGGACCCTATATATGATATAGAATAACCCACATAGTTTTATAA AAAATAAATCGGGATATTTT
Downstream 100 bases:
>100_bases AATTTCTGAATGTATTTTTAAAAATGAACATACCTTAGTCGACTTTGTAGGAAATATAACGATGGATATGGCCAAGATAG CCGTTGCTTCAGCCACATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MAREIYDPSWTGAMGDFLNGNTKINQLKPQHEFFDSIGLEKILRNEKQYHVVLTTAEANDIIDDITNRTQKKMGVSTPES FARGVGEQITSMEAFSRGIDINDPFAPIFKVTDPTSTYAGNIHDVRGLYNVIMEFKKIGIKATIFIGDNGTKFVKISGYA GLRKIITGTRYLTTNPQILEMGIGLRGIASGIIRGAKFCIIFFYRI
Sequences:
>Translated_206_residues MAREIYDPSWTGAMGDFLNGNTKINQLKPQHEFFDSIGLEKILRNEKQYHVVLTTAEANDIIDDITNRTQKKMGVSTPES FARGVGEQITSMEAFSRGIDINDPFAPIFKVTDPTSTYAGNIHDVRGLYNVIMEFKKIGIKATIFIGDNGTKFVKISGYA GLRKIITGTRYLTTNPQILEMGIGLRGIASGIIRGAKFCIIFFYRI >Mature_205_residues AREIYDPSWTGAMGDFLNGNTKINQLKPQHEFFDSIGLEKILRNEKQYHVVLTTAEANDIIDDITNRTQKKMGVSTPESF ARGVGEQITSMEAFSRGIDINDPFAPIFKVTDPTSTYAGNIHDVRGLYNVIMEFKKIGIKATIFIGDNGTKFVKISGYAG LRKIITGTRYLTTNPQILEMGIGLRGIASGIIRGAKFCIIFFYRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22982; Mature: 22851
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREIYDPSWTGAMGDFLNGNTKINQLKPQHEFFDSIGLEKILRNEKQYHVVLTTAEAND CCCCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHHHCCHHHHHCCCCEEEEEEEECCHHH IIDDITNRTQKKMGVSTPESFARGVGEQITSMEAFSRGIDINDPFAPIFKVTDPTSTYAG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC NIHDVRGLYNVIMEFKKIGIKATIFIGDNGTKFVKISGYAGLRKIITGTRYLTTNPQILE CCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCHHHHHHHCCCEEEECCCEEEE MGIGLRGIASGIIRGAKFCIIFFYRI CCCCHHHHHHHHHHCCEEEEEEEEEC >Mature Secondary Structure AREIYDPSWTGAMGDFLNGNTKINQLKPQHEFFDSIGLEKILRNEKQYHVVLTTAEAND CCCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHHHCCHHHHHCCCCEEEEEEEECCHHH IIDDITNRTQKKMGVSTPESFARGVGEQITSMEAFSRGIDINDPFAPIFKVTDPTSTYAG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC NIHDVRGLYNVIMEFKKIGIKATIFIGDNGTKFVKISGYAGLRKIITGTRYLTTNPQILE CCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCHHHHHHHCCCEEEECCCEEEE MGIGLRGIASGIIRGAKFCIIFFYRI CCCCHHHHHHHHHHCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA