| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is gltJ [H]
Identifier: 170026442
GI number: 170026442
Start: 4677440
End: 4678177
Strand: Direct
Name: gltJ [H]
Synonym: YPK_4238
Alternate gene names: 170026442
Gene position: 4677440-4678177 (Clockwise)
Preceding gene: 170026441
Following gene: 170026443
Centisome position: 99.74
GC content: 49.46
Gene sequence:
>738_bases ATGAATCTACATCATCTGACTGATTGGCTATTAGCCCCGCAATATCTTGGTTGGCTGTGGGATGGTTTTTTACTGACGTT GTGGATTTCCGCCTGTACGGTGGTGGCTGCCACGTTATTGGGATTTTTGCTGGCCGCGGCCAGAGACAGTGAGTTAAAGG CCTTGAAAGGCTTTGCTATTGGCTACAGTGCCTTATTCCGAAATACTCCTCTGCTGATCCAATTATTCTTTTGGTACTTT GCTGCCAGCCAATTCCTGCCAGCTTCTTGGATCCCTTGGCTCAATACTCCCCATGAAATTACGCTTGCCGGATTAACTCT GGCCTGGCCCTCTTTTGAGTTTTTAGCCGGTTTTGTCGGGTTGACACTCTATTCCACCGCATTTATTGCTGAAGAGCTGC GTGCGGGCATCAGCGGCGTAGCCAAGGGGCAGAAATATGCTGCACATGCGCTGGGGCTGACGGGGTGGCAATCGATGCGG TATGTGGTTTTGCCGCAGGCTTTGAAAATAGCCATGCCTCCGTTGCTGGGCCAATATATGAATATTATTAAAAACTCTTC ATTGGCAATGGCTATTGGTGTAGCTGAACTCTCCTATGCTTCCCGGCAGGTTGAAACTGAAACATTACGGACGTTTCAGG CATTCGGGGTTGCAACCCTATTGTATATTTTCATCATCGCGCTAATTGAGGCTTGGGGTATGTGGCGTCAACAGCGAACC GTCGTCCGAGGGCACTGA
Upstream 100 bases:
>100_bases GTCGGTATGTTAAGTTATGAAGTAAAAATAAGATGGATTTTATTGTGTACTTAAAAACTCATGCGATTAGAGCATCAGAT GGATATAGATATAAAAGCCT
Downstream 100 bases:
>100_bases GATGGATTTTACCATTATCGTTGATAACTGGCGTTATCTGCTGTGGGGGACTTTCCCTGATGGCCCTCTGGGAGGGGCGG CATTGACCGTGGTGATCAGT
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYF AASQFLPASWIPWLNTPHEITLAGLTLAWPSFEFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMR YVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT VVRGH
Sequences:
>Translated_245_residues MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYF AASQFLPASWIPWLNTPHEITLAGLTLAWPSFEFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMR YVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT VVRGH >Mature_245_residues MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYF AASQFLPASWIPWLNTPHEITLAGLTLAWPSFEFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMR YVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT VVRGH
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=33.7962962962963, Blast_Score=133, Evalue=9e-33, Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=35.2657004830918, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786873, Length=189, Percent_Identity=32.2751322751323, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1787030, Length=221, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI48994930, Length=114, Percent_Identity=42.1052631578947, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=28.7081339712919, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=28.2926829268293, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787087, Length=210, Percent_Identity=22.8571428571429, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27291; Mature: 27291
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GYSALFRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITLAGLTLAWPSFEFLAGFVG HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHEECCCCHHHHHHHHH LTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH NIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGH HHCCC >Mature Secondary Structure MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GYSALFRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITLAGLTLAWPSFEFLAGFVG HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHEECCCCHHHHHHHHH LTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH NIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGH HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]