| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is rbsR [C]
Identifier: 170026412
GI number: 170026412
Start: 4645923
End: 4646093
Strand: Reverse
Name: rbsR [C]
Synonym: YPK_4208
Alternate gene names: 170026412
Gene position: 4646093-4645923 (Counterclockwise)
Preceding gene: 170026413
Following gene: 170026409
Centisome position: 99.08
GC content: 49.71
Gene sequence:
>171_bases ATGGCACGTGCAGGTTTGCCAATTATTGCCGGGTATGAAGTTGTCAGTGATTTTGAATTTGGTGGTGGCCTGGTTGCCCT GAAGCAACGACTAAATAATCCAGAAGCTGAGCCACAAGTTCTGCCCCTGACTCCCGAGCTAATAGAACGCGGTTCGGTCT CCCTTCGTTAA
Upstream 100 bases:
>100_bases ATTCCATGGCGTGCCGAAATTGATAGCTTCTTACAAGAACGAGTGTAAAACGTGGCCACAATGAAAGATGTCGCCCGTCT GGCAGGGGTATCGTCAGGCA
Downstream 100 bases:
>100_bases ACATTATTTTTCACCTGTGGGGCTACTTTTTTCACATTACGGCCCTGAATTAAATTGTCTCCATCCCTGGGTTTGAGTAA CAAGAACACCAGAGATGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MARAGLPIIAGYEVVSDFEFGGGLVALKQRLNNPEAEPQVLPLTPELIERGSVSLR
Sequences:
>Translated_56_residues MARAGLPIIAGYEVVSDFEFGGGLVALKQRLNNPEAEPQVLPLTPELIERGSVSLR >Mature_55_residues ARAGLPIIAGYEVVSDFEFGGGLVALKQRLNNPEAEPQVLPLTPELIERGSVSLR
Specific function: Transcriptional Repressor For The Ribose Rbsdacbk Operon. Rbsr Binds To A Region Of Perfect Dyad Symmetry Spanning The Rbs Operon Transcriptional Start Site. The Affinity For The Rbs Operator Is Reduced By Addition Of Ribose, Consistent With Ribose Being
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6020; Mature: 5889
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAGLPIIAGYEVVSDFEFGGGLVALKQRLNNPEAEPQVLPLTPELIERGSVSLR CCCCCCCEEECCCEECCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHCCCCCCCC >Mature Secondary Structure ARAGLPIIAGYEVVSDFEFGGGLVALKQRLNNPEAEPQVLPLTPELIERGSVSLR CCCCCCEEECCCEECCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA