| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is grxC [C]
Identifier: 170026287
GI number: 170026287
Start: 4504042
End: 4504773
Strand: Direct
Name: grxC [C]
Synonym: YPK_4080
Alternate gene names: 170026287
Gene position: 4504042-4504773 (Clockwise)
Preceding gene: 170026285
Following gene: 170026288
Centisome position: 96.05
GC content: 46.31
Gene sequence:
>732_bases ATGTTTACTAGCCAAGAAGGTAAAAAAGTCCCGCAGGTAACTTTCCATACCCGTCAGGGCGACCAGTGGATTGACGTAAC AACCGACGATTTATTCAGTAATAAAACCGTGATTGTATTTTCACTACCGGGTGCCTTTACCCCAACCTGTTCTTCCAGTC ATCTGCCACGTTATAACGAATTAGCGGGTGTATTTAAACAACACGGTGTTGATAGCATTCTGTGTGTGTCGGTCAATGAT ACCTTCGTAATGAACGCTTGGAAATCAGATCAACACGCTGAAAATATTACATTTGTTCCAGATGGTAACGGTGAGTTTAC CAAAGGGATGAATATGTTGGTTGAGAAAGCAGATCTGGGCTTCGGTCCACGTTCATGGCGTTACTCCATGCTGGTACGTA ATGGCGTGGTAGAAAAAATGTTTGTCGAGCCAAACAAACCGGGCGACCCGTTTGAAGTATCTGATGCCGACACCATGTTG AAATATCTGGCACCTGATTTTAAAGTGCAGGAATCCGTGGCTGTCTTTACCAAACCGGGCTGCCCATTCTGTGCCAAAGC GAAACAAATGCTGCAAGATCATGGCCTTCAATATGAAGAAATTGTATTGGGTAAAGATGCAACGACCGTCAGCTTGCGTG CTGTAAGCGGCCGCTCCACGGTGCCACAGATCTTTATCGGAGGCCGTCACATTGGTGGCAGCGACGATCTGGAAAAGTAC CTACCAGCCTAA
Upstream 100 bases:
>100_bases CAGTGATTAGAACTATCAAGAGATAAAATTAATAATATGACCCAACAAAGAGACACCCAAAAAAATCTAACTTTTCTATT TTTTAATGAAGGAATTACAG
Downstream 100 bases:
>100_bases TTATGTTGATTAACAAACATATTAATAAAAATTAAAGCAATAGGAAGTAACTTGGTAGGCTCCGGCCTACCTTTTTTTCT GTTAGGAGTAGACATGAAAA
Product: glutaredoxin family protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MFTSQEGKKVPQVTFHTRQGDQWIDVTTDDLFSNKTVIVFSLPGAFTPTCSSSHLPRYNELAGVFKQHGVDSILCVSVND TFVMNAWKSDQHAENITFVPDGNGEFTKGMNMLVEKADLGFGPRSWRYSMLVRNGVVEKMFVEPNKPGDPFEVSDADTML KYLAPDFKVQESVAVFTKPGCPFCAKAKQMLQDHGLQYEEIVLGKDATTVSLRAVSGRSTVPQIFIGGRHIGGSDDLEKY LPA
Sequences:
>Translated_243_residues MFTSQEGKKVPQVTFHTRQGDQWIDVTTDDLFSNKTVIVFSLPGAFTPTCSSSHLPRYNELAGVFKQHGVDSILCVSVND TFVMNAWKSDQHAENITFVPDGNGEFTKGMNMLVEKADLGFGPRSWRYSMLVRNGVVEKMFVEPNKPGDPFEVSDADTML KYLAPDFKVQESVAVFTKPGCPFCAKAKQMLQDHGLQYEEIVLGKDATTVSLRAVSGRSTVPQIFIGGRHIGGSDDLEKY LPA >Mature_243_residues MFTSQEGKKVPQVTFHTRQGDQWIDVTTDDLFSNKTVIVFSLPGAFTPTCSSSHLPRYNELAGVFKQHGVDSILCVSVND TFVMNAWKSDQHAENITFVPDGNGEFTKGMNMLVEKADLGFGPRSWRYSMLVRNGVVEKMFVEPNKPGDPFEVSDADTML KYLAPDFKVQESVAVFTKPGCPFCAKAKQMLQDHGLQYEEIVLGKDATTVSLRAVSGRSTVPQIFIGGRHIGGSDDLEKY LPA
Specific function: The Disulfide Bond Functions As An Electron Carrier In The Glutathione-Dependent Synthesis Of Deoxyribonucleotides By The Enzyme Ribonucleotide Reductase. In Addition, It Is Also Involved In Reducing Some Disulfides In A Coupled System With Glutathione R
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=145, Percent_Identity=36.551724137931, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI1790039, Length=67, Percent_Identity=44.7761194029851, Blast_Score=65, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323138, Length=134, Percent_Identity=34.3283582089552, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI78706776, Length=125, Percent_Identity=47.2, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI78709078, Length=125, Percent_Identity=47.2, Blast_Score=108, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR011906 - InterPro: IPR014025 - InterPro: IPR013740 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin; PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 26893; Mature: 26893
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTSQEGKKVPQVTFHTRQGDQWIDVTTDDLFSNKTVIVFSLPGAFTPTCSSSHLPRYNE CCCCCCCCCCCEEEEEECCCCEEEEEECHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHH LAGVFKQHGVDSILCVSVNDTFVMNAWKSDQHAENITFVPDGNGEFTKGMNMLVEKADLG HHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC FGPRSWRYSMLVRNGVVEKMFVEPNKPGDPFEVSDADTMLKYLAPDFKVQESVAVFTKPG CCCCCHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHHHCCCCEECCCEEEEECCC CPFCAKAKQMLQDHGLQYEEIVLGKDATTVSLRAVSGRSTVPQIFIGGRHIGGSDDLEKY CCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEECCEECCCCHHHHHH LPA CCC >Mature Secondary Structure MFTSQEGKKVPQVTFHTRQGDQWIDVTTDDLFSNKTVIVFSLPGAFTPTCSSSHLPRYNE CCCCCCCCCCCEEEEEECCCCEEEEEECHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHH LAGVFKQHGVDSILCVSVNDTFVMNAWKSDQHAENITFVPDGNGEFTKGMNMLVEKADLG HHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC FGPRSWRYSMLVRNGVVEKMFVEPNKPGDPFEVSDADTMLKYLAPDFKVQESVAVFTKPG CCCCCHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHHHCCCCEECCCEEEEECCC CPFCAKAKQMLQDHGLQYEEIVLGKDATTVSLRAVSGRSTVPQIFIGGRHIGGSDDLEKY CCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEECCEECCCCHHHHHH LPA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]