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The map label for this gene is ytfQ [H]

Identifier: 170026278

GI number: 170026278

Start: 4488109

End: 4489065

Strand: Reverse

Name: ytfQ [H]

Synonym: YPK_4068

Alternate gene names: 170026278

Gene position: 4489065-4488109 (Counterclockwise)

Preceding gene: 170026279

Following gene: 170026277

Centisome position: 95.73

GC content: 46.5

Gene sequence:

>957_bases
ATGTACAGGCGTTTACTGTTAGCAGCAGCTGTAACAGCGGCAATGTGTAGTGCAGTTCAGGCAGCTCCGTTAGTTGTCGG
TTTTTCTCAAATTGGTTCAGAATCCGGTTGGCGCTCTGCGGAAACCAAGGTTGCGAAACAAGAAGCGGAAAAGCGTGGGA
TAACACTCAAGATCGCGGATGCTCAACAAAAACAAGAGAACCAAATAAAAGCTGTGAGATCTTTTATTGCTCAAGGTGTT
GATGCGATCTTTATCGCACCTGTAGTGGCTACCGGTTGGACGCCAGTCTTACAGGAAGCGAAAGAAGCCAAGATACCTGT
ATTCCTGCTCGACCGTATGATTGAGGTGAATGATCCTTCTTTGTATACGGCGGCTGTTGCCTCTGACAGTGTATATGAGG
GGAAAGTTGCGGGTGAGTGGCTATTGCAAGATGTAGCAGGCAAACCCTGTAATGTTGTTGAGTTACAAGGCACGGTTGGC
TCAAGTGTGGCAATTAACCGTAAGAAAGGCTTTGCTGACGGGATAGCTTCGGCACCTGGCGTGAAGATAATCCGCTCTCA
GTCAGGGGATTTCACGCGCAGTAAAGGCAAAGAAGTCATGGAAAGCTTCATTAAAGCGGAGCAAAACGGTAAAAATATTT
GCGCGGTCTATGCGCACAATGACGATATGGCGATTGGAGCTATTCAGGCAATTAAAGAAGCAGGTTTAAAACCGGGTTCA
GATATTAAAATCGTTTCCATTGATGGTGTTCCTGATATCTTCAAAGCAATGAGTAGTGGCGAAGCAAACGCGACCGTTGA
ATTAACGCCTAATATGGCCGGCCCTGCTTTAGATGCATTAATTGTGCTCAAAAAGGACGGTACCCAGCCACCTAAATTCA
TTCAGACAGAGTCCCGCCTGCTCCAGCCAGACACGGCTAAACAGGAATATGAGTTGAAGAAAAGTCTTGGTTATTGA

Upstream 100 bases:

>100_bases
AATTCAGGATGAAAACCAGTCTGAATGATCATCTTAGCTATTCTCAGGAATGGCAACGAGTCAGCGGCTTGACGATGACA
AATGAAGTGAGGAGAGAAAT

Downstream 100 bases:

>100_bases
TTCAGATGGCGGGGCTTGCCCCCGCCTGCTTTTATCACCTGTATTGGGTCAATATCTGAGTTGTTTTTGAACGTGGGTAC
ATCTGATGGAAATATTGTTA

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MYRRLLLAAAVTAAMCSAVQAAPLVVGFSQIGSESGWRSAETKVAKQEAEKRGITLKIADAQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPSLYTAAVASDSVYEGKVAGEWLLQDVAGKPCNVVELQGTVG
SSVAINRKKGFADGIASAPGVKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
DIKIVSIDGVPDIFKAMSSGEANATVELTPNMAGPALDALIVLKKDGTQPPKFIQTESRLLQPDTAKQEYELKKSLGY

Sequences:

>Translated_318_residues
MYRRLLLAAAVTAAMCSAVQAAPLVVGFSQIGSESGWRSAETKVAKQEAEKRGITLKIADAQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPSLYTAAVASDSVYEGKVAGEWLLQDVAGKPCNVVELQGTVG
SSVAINRKKGFADGIASAPGVKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
DIKIVSIDGVPDIFKAMSSGEANATVELTPNMAGPALDALIVLKKDGTQPPKFIQTESRLLQPDTAKQEYELKKSLGY
>Mature_318_residues
MYRRLLLAAAVTAAMCSAVQAAPLVVGFSQIGSESGWRSAETKVAKQEAEKRGITLKIADAQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPSLYTAAVASDSVYEGKVAGEWLLQDVAGKPCNVVELQGTVG
SSVAINRKKGFADGIASAPGVKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
DIKIVSIDGVPDIFKAMSSGEANATVELTPNMAGPALDALIVLKKDGTQPPKFIQTESRLLQPDTAKQEYELKKSLGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=318, Percent_Identity=75.7861635220126, Blast_Score=485, Evalue=1e-138,
Organism=Escherichia coli, GI1790192, Length=230, Percent_Identity=34.3478260869565, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1790526, Length=268, Percent_Identity=23.8805970149254, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 33866; Mature: 33866

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRRLLLAAAVTAAMCSAVQAAPLVVGFSQIGSESGWRSAETKVAKQEAEKRGITLKIAD
CHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
AQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPS
CHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC
LYTAAVASDSVYEGKVAGEWLLQDVAGKPCNVVELQGTVGSSVAINRKKGFADGIASAPG
EEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCC
VKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
DIKIVSIDGVPDIFKAMSSGEANATVELTPNMAGPALDALIVLKKDGTQPPKFIQTESRL
CEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
LQPDTAKQEYELKKSLGY
CCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MYRRLLLAAAVTAAMCSAVQAAPLVVGFSQIGSESGWRSAETKVAKQEAEKRGITLKIAD
CHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
AQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPS
CHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC
LYTAAVASDSVYEGKVAGEWLLQDVAGKPCNVVELQGTVGSSVAINRKKGFADGIASAPG
EEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCC
VKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
DIKIVSIDGVPDIFKAMSSGEANATVELTPNMAGPALDALIVLKKDGTQPPKFIQTESRL
CEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
LQPDTAKQEYELKKSLGY
CCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]