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The map label for this gene is yjfF [H]

Identifier: 170026275

GI number: 170026275

Start: 4484510

End: 4485502

Strand: Reverse

Name: yjfF [H]

Synonym: YPK_4065

Alternate gene names: 170026275

Gene position: 4485502-4484510 (Counterclockwise)

Preceding gene: 170026276

Following gene: 170026273

Centisome position: 95.65

GC content: 45.12

Gene sequence:

>993_bases
ATGTTAAAGCGTAATGTTCCCTTGCTGATTACTATCGCCGTTTTTATTCTGGGATATGCTTTCTGTCTGAGTCAATTTCC
CAGTTTCTCCTCCTCTCGAGTATGGTGTGATTTACTGACTGATAATGCTTTTCTTGGCATTGTTGCTGTCGGCATGACTT
TCGTTATTTTATCGGGGGGGATCGATTTATCTGTCGGCTCGGTTATTGCCTTTACTGGTGTGCTGCTGGCTAAGTTAATT
GGTACCTATGGTATTCATCCAGTCTATGCCTTTGCTATCGTCTTAGTTATGGGCGCAATGTTTGGTGCGTTGATGGGGTG
GATTATTGATTCCCTGAAACTTCCAGCGTTTATCATTACTCTTGCAGGGATGTTTTTTATCCGTGGTATGAGTTTTATCG
TTTCTGAAGAGTCGCTGCCGATTAACCACCCGATATATGAAACGTTGGCTAATTATGCCTGGCGTGTTCCTGGGGGTGGG
CGATTTACCTTGTTAGCATTTATTATGCTGATGGTTGTAGCTTTTGGCATCCTTTTGGCTCATCACACTCGTTTTGGTCA
TAACGTTTATGCGATTGGCGGTAATAGTGTTTCTGCGGGGTTGATGGGTGTCCCGGTCAGGAGAACGACCATTAAAATTT
ATATGCTATCCAGTACATTGGCCGCATTATCAGGCATTGTTTTCTCTCTCTACACGTCTGCGGGTTATGCGTTGGCGGCC
AGTGGTGTTGAGTTAGATGCTATTGCTGCGGTTGTCATTGGTGGCACATTACTGGCGGGCGGTATCGGTACGGTATTCGG
TACGTTGTTCGGTGTGTTAATTCAGGGCCTGATACAGAGTTATATTACTTTCGACGGTACACTCAGCTCGTGGTGGACCA
AAATTGTGATTGGTATTTTGCTCTTTAGCTTTATCGTGATTCAGAAAGCGATGAGCGCTTTTTATCTCAACCGCAGATCA
CGCCCTCAGTCATCGCCACTTACTCCCGTGTAA

Upstream 100 bases:

>100_bases
CGGAGTTTAATTTGGTGCTTAAAGCCATTGTCGTGCTGGCCGTATTAGTTGTGCAATCCCCGATGATCTCATTAAGCCAT
CTCTTCCAGAGGCGAAAATA

Downstream 100 bases:

>100_bases
CGCTCTGGGTCGCGTTATTCATGGGGGTTTTTAAGAGTTGTCTGATCAATGCTTGCTGGTCACTGTTTTGTAGCCAAACG
GCATACAGTGGCCGCACGAT

Product: inner membrane ABC transporter permease YjfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLKRNVPLLITIAVFILGYAFCLSQFPSFSSSRVWCDLLTDNAFLGIVAVGMTFVILSGGIDLSVGSVIAFTGVLLAKLI
GTYGIHPVYAFAIVLVMGAMFGALMGWIIDSLKLPAFIITLAGMFFIRGMSFIVSEESLPINHPIYETLANYAWRVPGGG
RFTLLAFIMLMVVAFGILLAHHTRFGHNVYAIGGNSVSAGLMGVPVRRTTIKIYMLSSTLAALSGIVFSLYTSAGYALAA
SGVELDAIAAVVIGGTLLAGGIGTVFGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGILLFSFIVIQKAMSAFYLNRRS
RPQSSPLTPV

Sequences:

>Translated_330_residues
MLKRNVPLLITIAVFILGYAFCLSQFPSFSSSRVWCDLLTDNAFLGIVAVGMTFVILSGGIDLSVGSVIAFTGVLLAKLI
GTYGIHPVYAFAIVLVMGAMFGALMGWIIDSLKLPAFIITLAGMFFIRGMSFIVSEESLPINHPIYETLANYAWRVPGGG
RFTLLAFIMLMVVAFGILLAHHTRFGHNVYAIGGNSVSAGLMGVPVRRTTIKIYMLSSTLAALSGIVFSLYTSAGYALAA
SGVELDAIAAVVIGGTLLAGGIGTVFGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGILLFSFIVIQKAMSAFYLNRRS
RPQSSPLTPV
>Mature_330_residues
MLKRNVPLLITIAVFILGYAFCLSQFPSFSSSRVWCDLLTDNAFLGIVAVGMTFVILSGGIDLSVGSVIAFTGVLLAKLI
GTYGIHPVYAFAIVLVMGAMFGALMGWIIDSLKLPAFIITLAGMFFIRGMSFIVSEESLPINHPIYETLANYAWRVPGGG
RFTLLAFIMLMVVAFGILLAHHTRFGHNVYAIGGNSVSAGLMGVPVRRTTIKIYMLSSTLAALSGIVFSLYTSAGYALAA
SGVELDAIAAVVIGGTLLAGGIGTVFGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGILLFSFIVIQKAMSAFYLNRRS
RPQSSPLTPV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=330, Percent_Identity=70.3030303030303, Blast_Score=472, Evalue=1e-134,
Organism=Escherichia coli, GI1788896, Length=320, Percent_Identity=36.5625, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1790191, Length=286, Percent_Identity=37.0629370629371, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI145693152, Length=281, Percent_Identity=35.2313167259786, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789992, Length=357, Percent_Identity=30.2521008403361, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1790524, Length=267, Percent_Identity=29.5880149812734, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787793, Length=296, Percent_Identity=29.0540540540541, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788471, Length=265, Percent_Identity=30.9433962264151, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787794, Length=258, Percent_Identity=29.0697674418605, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693214, Length=254, Percent_Identity=31.8897637795276, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35251; Mature: 35251

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRNVPLLITIAVFILGYAFCLSQFPSFSSSRVWCDLLTDNAFLGIVAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVLLAKLIGTYGIHPVYAFAIVLVMGAMFGALMGWIIDSLKLPAFIIT
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFFIRGMSFIVSEESLPINHPIYETLANYAWRVPGGGRFTLLAFIMLMVVAFGILLA
HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHH
HHTRFGHNVYAIGGNSVSAGLMGVPVRRTTIKIYMLSSTLAALSGIVFSLYTSAGYALAA
HHHHCCCEEEEECCCCCCCCCCCCCEEHHEEEEEEHHHHHHHHHHHHHHHHHHCCHHEEE
SGVELDAIAAVVIGGTLLAGGIGTVFGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFSFIVIQKAMSAFYLNRRSRPQSSPLTPV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLKRNVPLLITIAVFILGYAFCLSQFPSFSSSRVWCDLLTDNAFLGIVAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVLLAKLIGTYGIHPVYAFAIVLVMGAMFGALMGWIIDSLKLPAFIIT
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFFIRGMSFIVSEESLPINHPIYETLANYAWRVPGGGRFTLLAFIMLMVVAFGILLA
HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHH
HHTRFGHNVYAIGGNSVSAGLMGVPVRRTTIKIYMLSSTLAALSGIVFSLYTSAGYALAA
HHHHCCCEEEEECCCCCCCCCCCCCEEHHEEEEEEHHHHHHHHHHHHHHHHHHCCHHEEE
SGVELDAIAAVVIGGTLLAGGIGTVFGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFSFIVIQKAMSAFYLNRRSRPQSSPLTPV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]