| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170026264
Identifier: 170026264
GI number: 170026264
Start: 4472750
End: 4473628
Strand: Direct
Name: 170026264
Synonym: YPK_4054
Alternate gene names: NA
Gene position: 4472750-4473628 (Clockwise)
Preceding gene: 170026262
Following gene: 170026265
Centisome position: 95.38
GC content: 39.48
Gene sequence:
>879_bases ATGTTAGAAACCACCAAATCAACGGTACAGGCGTTATATTTTCCCTGTACTGTATTTAAAACCCAAAAACGTATGGATGA TTACGGTGCCGATGATATGCGGTGTGGTGATCTAAGCGCAACACAGTTAAAAACAGATTTTAATCTGCATAATATTTCAA GCAAGGTTAACCCGTACACGCTAACGTTGTTCCAACAGCTAAAGCCCATGCCTTATGGTTATGCTTATGATAAAAATCCT GAGAGCAAAAAGATAACACGGCAGGAATGTGTCAGGATCCTCTTTAATGAATTTCGCCACGAATCACGAAGTTTTGCTTT TTATGGCCCATATAAACACCTGATCGAAAAAATGATCGACCATATGCAGAATGGCAACGGCACACCGTTTCGGGATCTGT CTTTAGATGCCGCATTGAAAGAGCAAATACTGAGTGATTACACAGAAAAAAACAGTACGCGCCTGCTGTTGAGAAAAGTC CTAAATGAAAATATAGACTGGAGAAATAAGCTGTATCCAGCAGAAAAAAAAGATGACATAAGAAAATTTATTCTTGATGG TAGACTTCCAAAATTCGATAGATTTCAGGATAACTTTAATGGAATGGGGATCACCGTTCACGATACCTGGGCCACGGATA TCACGATAAAATCATTGCAGATCGACAATGACCGTTATCGCGCGATGGTGCATTACAAAATACAGGATCACTTCGGGCTG GATAATAATGATATTAAGAATACCAAGTTTAACCGGTTTCATTTCTTCCGCATATGGTTTGTCCTCCAACGATTCAACCA GTTTGGTTTCAAGCCATTTATGACTAATATGGAAGCCACAATAGAGATTACCGGGGGCCGTAATGAAAGCAAAAAGTAA
Upstream 100 bases:
>100_bases ATAGAAAACTGCACGGTCTTTATAACAATTATCCCGCGAGTGGCCTGCGGCCTGATAAGGGATATTGGAAGCCGTTAACA ACATAAAAGGAATTTATATT
Downstream 100 bases:
>100_bases AAAGACTCTCTATGCACTATTACTGATTGGCAGCGTTCTACTGGGTTATTTCTTCTGGTTATCGCTGCGCCCGGTGGAAA TTGTCGCTGTTCATAAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLETTKSTVQALYFPCTVFKTQKRMDDYGADDMRCGDLSATQLKTDFNLHNISSKVNPYTLTLFQQLKPMPYGYAYDKNP ESKKITRQECVRILFNEFRHESRSFAFYGPYKHLIEKMIDHMQNGNGTPFRDLSLDAALKEQILSDYTEKNSTRLLLRKV LNENIDWRNKLYPAEKKDDIRKFILDGRLPKFDRFQDNFNGMGITVHDTWATDITIKSLQIDNDRYRAMVHYKIQDHFGL DNNDIKNTKFNRFHFFRIWFVLQRFNQFGFKPFMTNMEATIEITGGRNESKK
Sequences:
>Translated_292_residues MLETTKSTVQALYFPCTVFKTQKRMDDYGADDMRCGDLSATQLKTDFNLHNISSKVNPYTLTLFQQLKPMPYGYAYDKNP ESKKITRQECVRILFNEFRHESRSFAFYGPYKHLIEKMIDHMQNGNGTPFRDLSLDAALKEQILSDYTEKNSTRLLLRKV LNENIDWRNKLYPAEKKDDIRKFILDGRLPKFDRFQDNFNGMGITVHDTWATDITIKSLQIDNDRYRAMVHYKIQDHFGL DNNDIKNTKFNRFHFFRIWFVLQRFNQFGFKPFMTNMEATIEITGGRNESKK >Mature_292_residues MLETTKSTVQALYFPCTVFKTQKRMDDYGADDMRCGDLSATQLKTDFNLHNISSKVNPYTLTLFQQLKPMPYGYAYDKNP ESKKITRQECVRILFNEFRHESRSFAFYGPYKHLIEKMIDHMQNGNGTPFRDLSLDAALKEQILSDYTEKNSTRLLLRKV LNENIDWRNKLYPAEKKDDIRKFILDGRLPKFDRFQDNFNGMGITVHDTWATDITIKSLQIDNDRYRAMVHYKIQDHFGL DNNDIKNTKFNRFHFFRIWFVLQRFNQFGFKPFMTNMEATIEITGGRNESKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34650; Mature: 34650
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETTKSTVQALYFPCTVFKTQKRMDDYGADDMRCGDLSATQLKTDFNLHNISSKVNPYT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCHHHHCCCCCCEE LTLFQQLKPMPYGYAYDKNPESKKITRQECVRILFNEFRHESRSFAFYGPYKHLIEKMID EEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH HMQNGNGTPFRDLSLDAALKEQILSDYTEKNSTRLLLRKVLNENIDWRNKLYPAEKKDDI HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHH RKFILDGRLPKFDRFQDNFNGMGITVHDTWATDITIKSLQIDNDRYRAMVHYKIQDHFGL HHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCC DNNDIKNTKFNRFHFFRIWFVLQRFNQFGFKPFMTNMEATIEITGGRNESKK CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECCCCCCCC >Mature Secondary Structure MLETTKSTVQALYFPCTVFKTQKRMDDYGADDMRCGDLSATQLKTDFNLHNISSKVNPYT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCHHHHCCCCCCEE LTLFQQLKPMPYGYAYDKNPESKKITRQECVRILFNEFRHESRSFAFYGPYKHLIEKMID EEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH HMQNGNGTPFRDLSLDAALKEQILSDYTEKNSTRLLLRKVLNENIDWRNKLYPAEKKDDI HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHH RKFILDGRLPKFDRFQDNFNGMGITVHDTWATDITIKSLQIDNDRYRAMVHYKIQDHFGL HHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCC DNNDIKNTKFNRFHFFRIWFVLQRFNQFGFKPFMTNMEATIEITGGRNESKK CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA