| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is rhlB [H]
Identifier: 170026246
GI number: 170026246
Start: 4452041
End: 4453327
Strand: Direct
Name: rhlB [H]
Synonym: YPK_4036
Alternate gene names: 170026246
Gene position: 4452041-4453327 (Clockwise)
Preceding gene: 170026230
Following gene: 170026247
Centisome position: 94.94
GC content: 48.72
Gene sequence:
>1287_bases ATGAGCAAAACACACTTGACTGAACAGAAGTTTTCCGACTTCGCCCTGCACCCGCTAGTTGTTGAAGCCCTTGAAAACAA AGGGTTTCAGTATTGCACGCCGATTCAGGCGTTAGCATTGCCACTCACCCTCTCTGGGCGTGATGTAGCAGGTCAGGCGC AAACCGGTACAGGCAAGACGCTGGCATTCTTGGCGTCTACTTTCCATTATTTGCTTTCTCACCCAGCAGAAGAGGGTCGC CAGACTAATCAACCACGCGCATTAATTATGGCACCAACGCGCGAATTAGCCGTGCAAATTCACTCCGATGCAGAATCACT TTCCCAGGTAACCGGGCTGAAGTTAGGTCTGGCTTATGGTGGGGATGGCTACGATAAACAGCTTAAAGTGCTGGAAAGTG GCGTTGATATCTTGATCGGTACAACAGGCCGTTTAATCGATTACGCGAAACAAAATTATATTAACCTCGGTGCGATTCAA GTCGTGGTATTGGATGAAGCGGATCGCATGTACGATCTAGGCTTTATTAAAGATATCCGCTGGCTGTTCCGCCGTATGCC TTCCGTTGATAAACGTTTAAATATGCTGTTTTCTGCCACTCTCTCGTATCGGGTACGTGAATTGGCATTCGAACAAATGA ATAATGCAGAATATGTTGAAGTGGAACCGTTACAAAAAACCGGTCACCGCATCAAAGAAGAGCTGTTCTATCCTTCAAAT GAAGAAAAAATGCGTCTGTTACAGACGTTAATTGAAGAAGAATGGCCTGATCGCTGTATTATTTTTGCTAATACCAAACA CCGTTGTGAAGAGATCTGGGGGCATTTGGCTGCTGATGGTCACCGCGTCGGTTTATTGACGGGTGATGTTGCTCAGAAAA AACGCCTGCGTATTCTCGAAGATTTCACCAAGGGCGATTTGGATATTCTGGTTGCCACCGATGTTGCTGCCCGTGGTTTA CACATTCCATTAGTGACCCACGTCTTCAACTATGACCTGCCAGATGACTGTGAAGATTACGTTCACCGCATTGGCCGTAC TGGCCGTGCTGGCGAGAGTGGTCACTCCATCAGTCTGGCCTGCGAAGAGTATGCATTAAACTTGCCAGCGATTGAGACCT ATACGGGCCATAGCATCCCGGTAAGCAAATATAACAGTGACGCGCTATTAACTGATCTACCAGCGCCTAAACGCCTGGCC CGTACCCGCACCGGGAATGGCCCACGCCGTAATTCTGCCCCACGCCGCAGTGGAGCACCACGGAATAACCGTAAGCGACC AGGCTGA
Upstream 100 bases:
>100_bases GTGTCTACCTCGTTGGTGTAGCATTAACCAACAGTAGGATGACTTTATTTCACCGGATACGCTTTCGTAAAGCAATAGTT AGCTGATATTCTACCACACT
Downstream 100 bases:
>100_bases TAAATGATGCTAAGTTCCACCTCACTTTATGCTGCCATCGATCTTGGCTCCAATAGTTTTCATATGTTGGTAGTACGTGA GGTGGCTGGCAGTATCCAAA
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGR QTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQ VVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVATDVAARGL HIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLA RTRTGNGPRRNSAPRRSGAPRNNRKRPG
Sequences:
>Translated_428_residues MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGR QTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQ VVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVATDVAARGL HIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLA RTRTGNGPRRNSAPRRSGAPRNNRKRPG >Mature_427_residues SKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQ TNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQV VVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSNE EKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLAR TRTGNGPRRNSAPRRSGAPRNNRKRPG
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI222352149, Length=352, Percent_Identity=40.625, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=35.195530726257, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=35.195530726257, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=38.5915492957746, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=38.5915492957746, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI41327771, Length=411, Percent_Identity=34.3065693430657, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=37.5350140056022, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI55749865, Length=356, Percent_Identity=35.9550561797753, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=35.8695652173913, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=35.8695652173913, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=35.8695652173913, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=35.230352303523, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=35.230352303523, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI21071032, Length=387, Percent_Identity=34.1085271317829, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI4758138, Length=344, Percent_Identity=37.2093023255814, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI262118318, Length=337, Percent_Identity=35.9050445103858, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=34.7457627118644, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=34.7457627118644, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=34.7457627118644, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=32.8912466843501, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=32.8912466843501, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI41327773, Length=373, Percent_Identity=34.8525469168901, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=33.2439678284182, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI50659095, Length=378, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=34.8404255319149, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=32.7027027027027, Blast_Score=184, Evalue=9e-47, Organism=Homo sapiens, GI38569503, Length=358, Percent_Identity=31.2849162011173, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=31.2849162011173, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI41327779, Length=393, Percent_Identity=34.3511450381679, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI164664518, Length=383, Percent_Identity=29.242819843342, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=31.6526610644258, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=31.6526610644258, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI13514831, Length=359, Percent_Identity=31.4763231197772, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=31.3725490196078, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI31542656, Length=368, Percent_Identity=32.8804347826087, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI188035877, Length=362, Percent_Identity=30.3867403314917, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=30.9973045822102, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI41327776, Length=371, Percent_Identity=30.9973045822102, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=30.9973045822102, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=29.4277929155313, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI17505907, Length=444, Percent_Identity=28.6036036036036, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=31.8181818181818, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI38327634, Length=350, Percent_Identity=31.7142857142857, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=32.8840970350404, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=32.8840970350404, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=31.1178247734139, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI9966805, Length=315, Percent_Identity=32.0634920634921, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=30.4945054945055, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=28.6821705426357, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=33.0383480825959, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI9506931, Length=404, Percent_Identity=25.2475247524752, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=33.6363636363636, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI154759257, Length=420, Percent_Identity=25.952380952381, Blast_Score=112, Evalue=7e-25, Organism=Escherichia coli, GI1790214, Length=428, Percent_Identity=88.785046728972, Blast_Score=785, Evalue=0.0, Organism=Escherichia coli, GI1787016, Length=371, Percent_Identity=39.622641509434, Blast_Score=270, Evalue=1e-73, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=37.9679144385027, Blast_Score=233, Evalue=1e-62, Organism=Escherichia coli, GI1788930, Length=346, Percent_Identity=38.728323699422, Blast_Score=218, Evalue=9e-58, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=35.6125356125356, Blast_Score=197, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=39.3939393939394, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=39.1184573002755, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=39.3939393939394, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=37.7410468319559, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI32565321, Length=366, Percent_Identity=34.9726775956284, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI86570094, Length=346, Percent_Identity=38.150289017341, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=35.2112676056338, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=35.3760445682451, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=34.6368715083799, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=35.8543417366947, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=31.5926892950392, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17507945, Length=338, Percent_Identity=35.5029585798817, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=32.7913279132791, Blast_Score=186, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17507877, Length=378, Percent_Identity=32.8042328042328, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=32.1621621621622, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=32.1621621621622, Blast_Score=184, Evalue=7e-47, Organism=Caenorhabditis elegans, GI71999646, Length=377, Percent_Identity=31.8302387267904, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI71999644, Length=377, Percent_Identity=31.8302387267904, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=33.6898395721925, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17507879, Length=381, Percent_Identity=32.5459317585302, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17509811, Length=403, Percent_Identity=31.7617866004963, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI115532548, Length=429, Percent_Identity=29.1375291375291, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI193208216, Length=387, Percent_Identity=31.266149870801, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=30.0771208226221, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=31.0924369747899, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI71990816, Length=349, Percent_Identity=33.5243553008596, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17552114, Length=364, Percent_Identity=29.9450549450549, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=33.2467532467532, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=33.2467532467532, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=33.2467532467532, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=33.2394366197183, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI193206561, Length=415, Percent_Identity=29.1566265060241, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17508543, Length=387, Percent_Identity=26.6149870801034, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17507641, Length=382, Percent_Identity=30.6282722513089, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.9465240641711, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17556951, Length=362, Percent_Identity=27.6243093922652, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17553716, Length=350, Percent_Identity=28, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71997889, Length=374, Percent_Identity=27.2727272727273, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25148203, Length=395, Percent_Identity=23.2911392405063, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=26.1261261261261, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71982862, Length=221, Percent_Identity=29.8642533936652, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=43.4782608695652, Blast_Score=82, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=38.4401114206128, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=427, Percent_Identity=36.0655737704918, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=37.3626373626374, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6321360, Length=369, Percent_Identity=37.1273712737127, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=33.5164835164835, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=36.0103626943005, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=436, Percent_Identity=30.045871559633, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=33.0687830687831, Blast_Score=182, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=33.5195530726257, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320041, Length=370, Percent_Identity=31.0810810810811, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6320224, Length=385, Percent_Identity=31.1688311688312, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=31.9559228650138, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=31.8559556786704, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6319714, Length=366, Percent_Identity=31.6939890710383, Blast_Score=159, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=30.6179775280899, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=30.2452316076294, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6322912, Length=337, Percent_Identity=32.0474777448071, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6322323, Length=337, Percent_Identity=32.0474777448071, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321963, Length=374, Percent_Identity=30.4812834224599, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=389, Percent_Identity=32.3907455012853, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=369, Percent_Identity=31.7073170731707, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=27.9236276849642, Blast_Score=129, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=25.5924170616114, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=434, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=418, Percent_Identity=28.2296650717703, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=403, Percent_Identity=25.8064516129032, Blast_Score=100, Evalue=5e-22, Organism=Drosophila melanogaster, GI24584399, Length=376, Percent_Identity=34.5744680851064, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=39.2655367231638, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI21356161, Length=340, Percent_Identity=39.1176470588235, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=35.7746478873239, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=36.4864864864865, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=38.5674931129477, Blast_Score=214, Evalue=8e-56, Organism=Drosophila melanogaster, GI24644479, Length=370, Percent_Identity=35.6756756756757, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI281361218, Length=370, Percent_Identity=35.6756756756757, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24644481, Length=370, Percent_Identity=35.6756756756757, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24644487, Length=370, Percent_Identity=35.6756756756757, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI45551833, Length=370, Percent_Identity=35.6756756756757, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24644485, Length=370, Percent_Identity=35.6756756756757, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24644483, Length=370, Percent_Identity=35.6756756756757, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=34.9593495934959, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24584994, Length=369, Percent_Identity=34.4173441734417, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=34.5505617977528, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24642151, Length=367, Percent_Identity=34.8773841961853, Blast_Score=197, Evalue=8e-51, Organism=Drosophila melanogaster, GI24585582, Length=388, Percent_Identity=34.020618556701, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI28575014, Length=383, Percent_Identity=30.5483028720627, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=37.7777777777778, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=32.1621621621622, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24666101, Length=366, Percent_Identity=30.327868852459, Blast_Score=165, Evalue=5e-41, Organism=Drosophila melanogaster, GI24583281, Length=382, Percent_Identity=29.8429319371728, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI24583279, Length=382, Percent_Identity=29.8429319371728, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=31.8435754189944, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=31.8435754189944, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=31.8435754189944, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI24642822, Length=387, Percent_Identity=31.5245478036176, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=32.1329639889197, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=31.6666666666667, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=31.6666666666667, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24582080, Length=345, Percent_Identity=31.0144927536232, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24582078, Length=345, Percent_Identity=31.0144927536232, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI17136248, Length=345, Percent_Identity=31.0144927536232, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24582075, Length=345, Percent_Identity=31.0144927536232, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI21355559, Length=377, Percent_Identity=31.5649867374005, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI20130173, Length=426, Percent_Identity=30.2816901408451, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI19920478, Length=347, Percent_Identity=30.835734870317, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI17647335, Length=377, Percent_Identity=29.1777188328912, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=27.2264631043257, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=31.1178247734139, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI18859659, Length=240, Percent_Identity=34.1666666666667, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI28571338, Length=240, Percent_Identity=34.1666666666667, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24640164, Length=378, Percent_Identity=24.6031746031746, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47947; Mature: 47816
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHEEEEECCCCCCCCCCCCCCHH LAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYG HHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCHHHEEEECCCHHHHHHHHCCEEEEEEC GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEECEEEEEEECCCCCHHHHHHHHHHH WLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSN HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCC EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA HHCCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAP EHHHHCCCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCC RNNRKRPG CCCCCCCC >Mature Secondary Structure SKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHEEEEECCCCCCCCCCCCCCHH LAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYG HHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCHHHEEEECCCHHHHHHHHCCEEEEEEC GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEECEEEEEEECCCCCHHHHHHHHHHH WLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSN HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCC EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA HHCCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAP EHHHHCCCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCC RNNRKRPG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA