| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026204
Identifier: 170026204
GI number: 170026204
Start: 4404375
End: 4405574
Strand: Reverse
Name: 170026204
Synonym: YPK_3993
Alternate gene names: NA
Gene position: 4405574-4404375 (Counterclockwise)
Preceding gene: 170026205
Following gene: 170026202
Centisome position: 93.95
GC content: 39.67
Gene sequence:
>1200_bases ATGAGCGATATAAACATTATTGAACCCAGGTTCATACCCATAAAAAGCCCTATCGCGGCTAGATTGGATGGCAGTGATTT GATCGATGAACGGCCTCAAAAGATTAATTTTCTCGGTAAGAGATTAAACTCCATAGCCGATATTAATATTGACTCAAAAA ACAAAAAAATAAATATAAATATTGCTGAGAAGGCATTTAGTAGTGACTATATTCCTGAGGAATATATCTATATTGCTGTG TGGGATACTAAAGGAAAAATGGTTTTTCAAAAAAAATTATCAGATGCAGAGATAAAAGAAGAGAAAATAGAACTTCCATT TGAGGTGGGTTATCAACTTGAAATGTACCACCCTATACCCAGCAGACTCGTTAGTTCTCCTGATCTTTATAGTATTATTG ACTCCAATTCTTCATTTACTCTTCTTGTAATGACGCCATTAGGTGTGACAAATCCTAAGATGGAATCTTATCCTACCGAT ATTATCGAGGCGGATTTTATTCATCCAAACTCCGTTTCAGTGGGGGTCAATGCGGATGTTGTTGAACCTGCATCTACAGC GGAACCCACAACGTCTACCCCTATCGCTCCTGATACCCCTTCTGCCAGCACCGATCCCATCGTCAGCACCAGTACCCGCA CGGGTATCGATTCGACAACAAAATTGATGGTATCGTTCCAGTTCAAGCTGTTGGGCGTATGTGATTATGATATTGCGACA GTGACCATCGATGAAGAGAGTAAACTGGCGGGTATTAAGATTGTTACTGACACCCCCCATTGTCATTTTGGTGATGAGCT GTATGCCAGTATTAAAGTGACCGATAAACAAGGGCACATCACGTTTGAGGAAAAACTTTATGGCACGAATGCGAATATTT CAAATACCATTATTCCCTTCGAAAAAGGTTATAAATTAGATATCTTCCATGCTGAGCCTAGCCGGTTACGTGTTTCATCC GGTGATAGCGATACTTTAATTCCAGAGTCCAAGCAGAATAGTTTTATCATGACATCAATTGGTATAGAAAATACCAGGCA GGGCAGTGCCGAGGCAATAATATCAGATCAATTCGATACAGAAAAATTGGTTCAAGATATGTCTTCTTTCGGTGATTCTT CCATTGCGCCCGTGGATAATGTCTACGGATACATGGGTGAAAAAAATCACTATCAGAATGTAGTGAGTCACGTTGAATAA
Upstream 100 bases:
>100_bases AATAAAGACTAATTAGTTGTTCTATATATTCATGAAGATAATGGTATCGCAGTATTCTAATTTAATAGAAAAGCGAAATT TATCTGAATGGAGTTAAAAT
Downstream 100 bases:
>100_bases TTAATTATGGCTCTCTTTCCTCTGAATCTCTGAAGAGAAGAAAGAGAAAAAAGAGAGCCATGTTTACGGCGAGTTATTTA TGCTGTTGCTGTTTTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Viral Enhancin Protein; Metallprotease Enhancin Family
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSDINIIEPRFIPIKSPIAARLDGSDLIDERPQKINFLGKRLNSIADINIDSKNKKININIAEKAFSSDYIPEEYIYIAV WDTKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPSRLVSSPDLYSIIDSNSSFTLLVMTPLGVTNPKMESYPTD IIEADFIHPNSVSVGVNADVVEPASTAEPTTSTPIAPDTPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPFEKGYKLDIFHAEPSRLRVSS GDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDTEKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE
Sequences:
>Translated_399_residues MSDINIIEPRFIPIKSPIAARLDGSDLIDERPQKINFLGKRLNSIADINIDSKNKKININIAEKAFSSDYIPEEYIYIAV WDTKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPSRLVSSPDLYSIIDSNSSFTLLVMTPLGVTNPKMESYPTD IIEADFIHPNSVSVGVNADVVEPASTAEPTTSTPIAPDTPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPFEKGYKLDIFHAEPSRLRVSS GDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDTEKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE >Mature_398_residues SDINIIEPRFIPIKSPIAARLDGSDLIDERPQKINFLGKRLNSIADINIDSKNKKININIAEKAFSSDYIPEEYIYIAVW DTKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPSRLVSSPDLYSIIDSNSSFTLLVMTPLGVTNPKMESYPTDI IEADFIHPNSVSVGVNADVVEPASTAEPTTSTPIAPDTPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIATV TIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPFEKGYKLDIFHAEPSRLRVSSG DSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDTEKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44142; Mature: 44011
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDINIIEPRFIPIKSPIAARLDGSDLIDERPQKINFLGKRLNSIADINIDSKNKKININ CCCCCEECCEEEECCCCCEEECCCCHHHHCCCHHHHHHHHHHCCEEEEEECCCCCEEEEE IAEKAFSSDYIPEEYIYIAVWDTKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIP EHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHCHHHCCCCHHCCCEEEEECCCH SRLVSSPDLYSIIDSNSSFTLLVMTPLGVTNPKMESYPTDIIEADFIHPNSVSVGVNADV HHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCE VEPASTAEPTTSTPIAPDTPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT ECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEEEECCCEEE VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPF EEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEHHEEECCCCCCCCEEEEC EKGYKLDIFHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDT CCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCH EKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE HHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure SDINIIEPRFIPIKSPIAARLDGSDLIDERPQKINFLGKRLNSIADINIDSKNKKININ CCCCEECCEEEECCCCCEEECCCCHHHHCCCHHHHHHHHHHCCEEEEEECCCCCEEEEE IAEKAFSSDYIPEEYIYIAVWDTKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIP EHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHCHHHCCCCHHCCCEEEEECCCH SRLVSSPDLYSIIDSNSSFTLLVMTPLGVTNPKMESYPTDIIEADFIHPNSVSVGVNADV HHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCE VEPASTAEPTTSTPIAPDTPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT ECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEEEECCCEEE VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPF EEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEHHEEECCCCCCCCEEEEC EKGYKLDIFHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDT CCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCH EKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE HHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA