Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is 170026179
Identifier: 170026179
GI number: 170026179
Start: 4377954
End: 4379060
Strand: Direct
Name: 170026179
Synonym: YPK_3968
Alternate gene names: NA
Gene position: 4377954-4379060 (Clockwise)
Preceding gene: 170026178
Following gene: 170026186
Centisome position: 93.36
GC content: 43.0
Gene sequence:
>1107_bases ATGAACATAAAAAACAAACCACTGCTTATCGGGTTATTGCTGTTATTCCTACACCCCACAACTGCCGCAGCCACCAAGTG GGTTGGGAACTATTTTTACCCATTAGCCAATAAGTATTCGAACTGTAACGTCACGTTATTAGAAGATAATAGTGTCGCGG TTTCTTTTGATGTCACATTGATAGACGATTTATTTGAGACCGACCGTGGCCCACATCTTCAACGCTGGAAAAAGATAATT GGTACTCAGCAAGATGTTCTGTTGGTACAGAATAATGCTTTACTTTTTCTCTATTTTTATCATGCCGATGGTTCAGCTGA TTTTAGTATCCGGCCTGGGGATATCCAAAATATGTCACTGAATGGCATACCCGTTCAAGAGATTGATTACAACCTCCAAG AGGCAAGGTTTGTCAGCACCCATGCCTTTTCAAACCAAAGTTATCACGTGTCATTCAACATTACGGCAAATGCCCTTAAA CATATTAGAATGGGTGCCACCATTGGGGGGGTACTCCATTCCGAAGGGTTGTTCTATTCCGTGCGTTCACCACAAGGTGT CGCATTTAATCAATCAGGTAATCAATGCGAATTCTTTGATCCACTGACAGAACAAGCCCCCGTTAATGCTTTGCATATTG ACCCTAAATTTCGGTTGGGATCTGCAATATGGCAGTTAAAATCCCTCGATCTGGATCATTTGCTCGATAGCACGGCTGAT AACCATGGGTTGCATGCACCATTAGTTAACGGCCCGGCTAACCGTTTTTGTATCCATTATCCGGCGATAGGTACGCAAAA TAGGCGTTATATGATCAGTGCCAGTAATCTCAATGGGTTAGCTGAGAATAATCGCTATTTTCAGTTAAAAGATAGCCGGG GTGAGCACATCATCAACTACAAGGTCACACTAAAAAATCATGAGGATAGCGAGGCTGATTTTTCATTACCCAAAGAGAAA AAGTTTATTCAGCTAAAGAGTGATACTAGCAGCGGCGACGAAGCACAGATGTGCTGGTCACCCCGCATTCGGGTTTACAG TACCGATACCACCGATAAAGGTCACTACACGGATACGCTGAATTTTACTATCACGCCGTTAGCCTAA
Upstream 100 bases:
>100_bases AATAGTTAATAGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAAT CATCACGGAGAGACCATTAA
Downstream 100 bases:
>100_bases TTTCAATGACGTTATTAATCGTTAGATTATCAATAAGCTGAACACTCAATAATTCGAGTTGCAACAGAGCAATCAACGCA TAGGCAACTCGAAATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTLIDDLFETDRGPHLQRWKKII GTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSLNGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALK HIRMGATIGGVLHSEGLFYSVRSPQGVAFNQSGNQCEFFDPLTEQAPVNALHIDPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAENNRYFQLKDSRGEHIINYKVTLKNHEDSEADFSLPKEK KFIQLKSDTSSGDEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA
Sequences:
>Translated_368_residues MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTLIDDLFETDRGPHLQRWKKII GTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSLNGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALK HIRMGATIGGVLHSEGLFYSVRSPQGVAFNQSGNQCEFFDPLTEQAPVNALHIDPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAENNRYFQLKDSRGEHIINYKVTLKNHEDSEADFSLPKEK KFIQLKSDTSSGDEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA >Mature_368_residues MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTLIDDLFETDRGPHLQRWKKII GTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSLNGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALK HIRMGATIGGVLHSEGLFYSVRSPQGVAFNQSGNQCEFFDPLTEQAPVNALHIDPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAENNRYFQLKDSRGEHIINYKVTLKNHEDSEADFSLPKEK KFIQLKSDTSSGDEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41400; Mature: 41400
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTL CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECHHCCCCCCCEEEEEECCCEEEEEEEEE IDDLFETDRGPHLQRWKKIIGTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSL EHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCEEECCCCCCEEEE NGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALKHIRMGATIGGVLHSEGLFYS CCCCHHHHCCCHHHHEEEEEEEECCCEEEEEEEEEHHHHHHHHCCCEECCEEECCCEEEE VRSPQGVAFNQSGNQCEFFDPLTEQAPVNALHIDPKFRLGSAIWQLKSLDLDHLLDSTAD ECCCCCEEECCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHCCCC NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAENNRYFQLKDSRGEHIINY CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEE KVTLKNHEDSEADFSLPKEKKFIQLKSDTSSGDEAQMCWSPRIRVYSTDTTDKGHYTDTL EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCEEEEE NFTITPLA EEEEEECC >Mature Secondary Structure MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTL CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECHHCCCCCCCEEEEEECCCEEEEEEEEE IDDLFETDRGPHLQRWKKIIGTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSL EHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCEEECCCCCCEEEE NGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALKHIRMGATIGGVLHSEGLFYS CCCCHHHHCCCHHHHEEEEEEEECCCEEEEEEEEEHHHHHHHHCCCEECCEEECCCEEEE VRSPQGVAFNQSGNQCEFFDPLTEQAPVNALHIDPKFRLGSAIWQLKSLDLDHLLDSTAD ECCCCCEEECCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHCCCC NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAENNRYFQLKDSRGEHIINY CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEE KVTLKNHEDSEADFSLPKEKKFIQLKSDTSSGDEAQMCWSPRIRVYSTDTTDKGHYTDTL EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCEEEEE NFTITPLA EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA