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The map label for this gene is cstA [H]

Identifier: 170026159

GI number: 170026159

Start: 4354465

End: 4356276

Strand: Reverse

Name: cstA [H]

Synonym: YPK_3948

Alternate gene names: 170026159

Gene position: 4356276-4354465 (Counterclockwise)

Preceding gene: 170026160

Following gene: 170026158

Centisome position: 92.9

GC content: 48.73

Gene sequence:

>1812_bases
ATGCAACATGCGATTACCTTTGTTATCGCTTCCGCGTGTATCCTTACGATCTGCTACCGTTTATACGGTATCTTTTTTGT
TCGTAAGGTGCTGCGCGTCGATGACAGTGAAGTTACCCCTTCCCATACCTTTGAAGATGGCAAAGATTACGTTCCGACTA
AAAAGTGGGTGAACTTTGGTAGCCACTTCGCCGCAATCGCGGCGGCAGGCCCCTTGGTTGGCCCGGTGTTGGCTGCTCAA
TACGGGTATTTACCCGGCTTCTTATGGCTTTTGATCGGTTGTGTTATCGGCGGTGCCGTACACGATACGGTCGTCTTGTT
TGCCTCAATGAAACATCAGGGGAAATCCCTGTCAGAAGTCGCTAAATCCGAACTTGGCCCAGTTGCTGGCTGGTGTACCG
GCCTGGCGATGTTGTTCATTATCACTATTACCATGGCCGGGTTATCGATGGTGGTCGTACATGCTCTGGAACGTAACCCT
TGGGGGACTTTCGCAGTGTTCATGACCATCCCTATCGCCATCTGTGTTGGCTTGTGGGAACGCATGACTGGCAGCATGAA
AGGGGCTTCGTATGTGGGTATTGCCGCTATCATGGTGTGCGTATTTGTCGGCCCGTATATTGAAGGCACTTGGCTTGGTG
AATGGTTAATGCTGAAAGCTGATACGGTCAGTATTATTCTGCCAATGTATGCTTTCTTTGCAACCGCACTGCCTGTCTGG
ATGTTGTTAACCCCACGTGGTTACCTTTCCAGCTTTATGAAGATCGGTGTGTTCGGTGCACTGATTGTTGGTGTTGTCTT
CATTAATCCTGAAATTCAATTCCCTGCGGTTACGCAGTTTATTCACGGCGGTGGCCCAGTTCTTGCGGGACCGGTTTGGC
CGTTTATCTCTATTACTATTGCCTGTGGTGCTATCTCTGGGTTCCATGCCTTTATCGGTTCGGGTACGACACCGAAACAG
ATCGATAAATGGAGCGATATCTTGCCCGTCGGTTTTGGTGCGATGCTGGCAGAATGTATGGTTGGGGTTATGGCCCTTAT
CGCCGCAACCTCTTTGCATCCTGCTGACTACTTTGCCATTAACTCCTCTGCTGAAGCCTGGAGTGCGCTTGGTATGGAGG
TTGTGAACCTGCCAAAATTGAGTGAAGAAATTGGTTTGGACCTGTATGGCCGTACCGGTGGTGCTGTCACTCTGGCTGTA
GGGATGACCGATATCTTCATTCGTGTGCCATGGTTTAATAGTTTGGCTGCTTACTTCTTCCAATTTGTTGTTATGTTTGA
AGCGGTGTTTATCCTGACTGCGGTTGATTCAGGTACCCGTGTTGCCCGTTATTTACTGCAAGATTTTCTGGGCGATATCT
GGGCTCCACTGAAACGGACCGATTGGTTACCAGGAACATTGGTTTGTAGTGTTATTGCCTGTGCATTGTGGGGTTACCTC
CTTAACTCAGGTGATATTAACTCTGTCTGGGCATTGTTCGGAGTATCGAACCAATTAATGGCTTCTGTTGGCTTAATCAT
TGGTGCCACGATTATCCTGCGCTTGGCGACCAAGCGTGTGTATATGCTGACCTGTGTTATTCCTCTGGCTTACCTGTTTG
TCACAGTAAATTACGCCGGCTATTGGATGATCACTCACGTGTACTTTAATTCAGCGGCTAAAGGCTACAACCTGTTCAAT
GGTATCATCTCAATTATCATGATGACCTTGGGTGTAATCATCTTGATCTCCGCGCTGAGGAAATGGCGTGAGCTATGGAT
CCGCAGGTCTGCTGAGATGGCTGGCAACAAAGTGGTTACTGCCAACGCCTGA

Upstream 100 bases:

>100_bases
ACCGCTTAATGATACAAACTACCGCTTAACCAGTTCGCTGATATTTCTCTTATGGCGAGGCGTATGTTTACGCCTGATAA
ATTCCCTGGAGAGAATGCTC

Downstream 100 bases:

>100_bases
TACCACTGACTTATTGTGCTAATTTGTTTAAACGGCTGGAATCTTCTAGCCGTTTATTTTTTGTTAAGTTATAGCTACTG
CATTTTGAGTATGCTGATAT

Product: carbon starvation protein CstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFGSHFAAIAAAGPLVGPVLAAQ
YGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNP
WGTFAVFMTIPIAICVGLWERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALPVW
MLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITIACGAISGFHAFIGSGTTPKQ
IDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTLAV
GMTDIFIRVPWFNSLAAYFFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWGYL
LNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAGYWMITHVYFNSAAKGYNLFN
GIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVTANA

Sequences:

>Translated_603_residues
MQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFGSHFAAIAAAGPLVGPVLAAQ
YGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNP
WGTFAVFMTIPIAICVGLWERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALPVW
MLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITIACGAISGFHAFIGSGTTPKQ
IDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTLAV
GMTDIFIRVPWFNSLAAYFFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWGYL
LNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAGYWMITHVYFNSAAKGYNLFN
GIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVTANA
>Mature_603_residues
MQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFGSHFAAIAAAGPLVGPVLAAQ
YGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNP
WGTFAVFMTIPIAICVGLWERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALPVW
MLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITIACGAISGFHAFIGSGTTPKQ
IDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTLAV
GMTDIFIRVPWFNSLAAYFFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWGYL
LNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAGYWMITHVYFNSAAKGYNLFN
GIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVTANA

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=572, Percent_Identity=42.1328671328671, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI87082431, Length=584, Percent_Identity=40.0684931506849, Blast_Score=414, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 65429; Mature: 65429

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCC
SHFAAIAAAGPLVGPVLAAQYGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEV
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH
AKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNPWGTFAVFMTIPIAICVGLWE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALPVW
HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
MLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITI
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHH
ACGAISGFHAFIGSGTTPKQIDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAI
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
NSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTLAVGMTDIFIRVPWFNSLAAYFF
CCCHHHHHHHCHHHHCCCCHHHHHCCEEECCCCCEEEEEECCEEEEEECCCHHHHHHHHH
QFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWGYL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHH
LNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAG
HCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
YWMITHVYFNSAAKGYNLFNGIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ANA
ECC
>Mature Secondary Structure
MQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCC
SHFAAIAAAGPLVGPVLAAQYGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEV
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHH
AKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNPWGTFAVFMTIPIAICVGLWE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALPVW
HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
MLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITI
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHH
ACGAISGFHAFIGSGTTPKQIDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAI
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
NSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTLAVGMTDIFIRVPWFNSLAAYFF
CCCHHHHHHHCHHHHCCCCHHHHHCCEEECCCCCEEEEEECCEEEEEECCCHHHHHHHHH
QFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWGYL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHH
LNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAG
HCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
YWMITHVYFNSAAKGYNLFNGIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ANA
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]