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The map label for this gene is insK [C]

Identifier: 170026138

GI number: 170026138

Start: 4326860

End: 4327615

Strand: Reverse

Name: insK [C]

Synonym: YPK_3925

Alternate gene names: 170026138

Gene position: 4327615-4326860 (Counterclockwise)

Preceding gene: 170026139

Following gene: 170026137

Centisome position: 92.28

GC content: 49.6

Gene sequence:

>756_bases
ATGATGCAGAGCCGCACTGTATACAACTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGC
GGAGACGCGCATCCGTTATGGCTGTCCGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAA
CGCACCGTATTTACTGTCTTGAGGGTCTCAATCTACGTTCGAAACGTCCACGGCGGCATGTGACAGCGAGGCACAGGCAC
GCACGTCCAGAAGTGACCGCGTTAGATCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGT
CAGGGCGCTAACTATAGTGGATAATTTTAGTCGTGAATGTCTGGCGATCGAGGTCGGTCAGGGGTTACGTGGAGATGATG
TTGTGGCTGTCATGGACAGATTAAAACATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTC
ATCTCGAAGTCGATGGACCGATGGGCGAATGAAAACAGGGTCACGATGGACTTTTCAGGCCCCGGAAAGCCTACAGATAA
TGCCTTTATCGAGTCATTTAATGGCAGTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTC
AGGAGAAAATTGAACAATGGCGGCAAGAATATAATCATTTTCGTCCGCATTCTTCGTTAAATAACCTGACTCCGGCAGAA
TTTGCTCGAAGTCATCAAAAAGGTCCGGATCTCTGA

Upstream 100 bases:

>100_bases
ATGTCATCCGAAAAAAGTTCTGAGGCCGCTGCAGAAGCGTGATGCCGTGGAATATCTGCTGGCGGCGTACCGTATCGGAG
TACGCAGAGGGTGCAGGCTG

Downstream 100 bases:

>100_bases
TTTAGCCTGGTACGGATATTGGGGAGGGATCATCCTCTCCTTATTATTTTGTTCGTCGCGGCCCTTGAGTGGGGATACTG
TGGGTATAATCGATCACCGG

Product: Integrase catalytic subunit

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTARHRH
ARPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEF
ISKSMDRWANENRVTMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSSLNNLTPAE
FARSHQKGPDL

Sequences:

>Translated_251_residues
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTARHRH
ARPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEF
ISKSMDRWANENRVTMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSSLNNLTPAE
FARSHQKGPDL
>Mature_251_residues
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTARHRH
ARPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEF
ISKSMDRWANENRVTMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSSLNNLTPAE
FARSHQKGPDL

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=241, Percent_Identity=26.1410788381743, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786462, Length=243, Percent_Identity=26.3374485596708, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790724, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789424, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789224, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788305, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787669, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786558, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 29389; Mature: 29389

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCL
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCEEEEE
EGLNLRSKRPRRHVTARHRHARPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSREC
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCE
LAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWANENRVTMDFSG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECC
PGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSSLNNLTPAE
CCCCCCHHHHHHHCCHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
FARSHQKGPDL
HHHHCCCCCCC
>Mature Secondary Structure
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCL
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCEEEEE
EGLNLRSKRPRRHVTARHRHARPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSREC
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCE
LAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWANENRVTMDFSG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECC
PGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSSLNNLTPAE
CCCCCCHHHHHHHCCHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
FARSHQKGPDL
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]