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The map label for this gene is rhaT

Identifier: 170026053

GI number: 170026053

Start: 4230513

End: 4231547

Strand: Direct

Name: rhaT

Synonym: YPK_3840

Alternate gene names: 170026053

Gene position: 4230513-4231547 (Clockwise)

Preceding gene: 170026050

Following gene: 170026058

Centisome position: 90.21

GC content: 48.79

Gene sequence:

>1035_bases
ATGAATAATGCGATTATATTGGGGATAATTTGGCATCTGGTCGGTGCTGCCAGTGCCGCGTGTTTCTACGCGCCGTTTAA
ACAAGTTAAGAAATGGTCATGGGAAACCATGTGGTCTATTGGGGGGTTGGTCTCCTGGCTTATCCTTCCATGGACGGTCA
GCTATCTGTTATTACCTGATTTTTGGCAATATTACGGTTCCTTCAGCATCGCTACCTTACTGCCGGTATTTCTATTCGGC
GCTATGTGGGGGATAGGTAACATCAACTATGGCCTGACCATGCGTTACCTTGGGATGTCGATGGGAATAGGGATAGCCAT
CGGTATCACACTCATTATCGGCACGTTGATGACCCCTATTCTGCAAGGGCGTTTTGATGTGCTCCTCGGTACCCCCGGTG
GGCGAATGACCCTTTTAGGGGTGTTCGTCGCCCTGATCGGTGTTGCCATCGTCAGTTATGCCGGGTTACTGAAAGAACGG
GCAATGGGCATTCAGGCGGAAGAGTTCAACCTGAAAAAGGGGCTAATATTGGCCGTGATGTGCGGTATTTTCTCCGCCGG
TATGTCATTTGCTATGGATGCCGCAAAACCGATGCATGAAGCCGCCAGCGCATTAGGGATCAACTCACTGTATGTCGCCC
TACCAAGCTACGTCATAATTATGGGAGGCGGGGCGATCATCAACCTCAGCTATTGTTTTATCCGGTTGGCAACACTTAAA
AACTTGTCAGTCAAAGCCGACTTCTCGGTTGCCAAGCCACTGCTGATCACCAACATTCTGTTCTCGGCATTAGCCGGTTT
GATGTGGTATCTGCAATTCTTCTTCTATGCTTGGGGCCACGCCAAGATCCCACAACAGTATGATTATATGAGCTGGATGC
TGCATATGAGCTTCTATGTATTGTGTGGCGGTATTGTCGGCCTGCTACTCAAAGAGTGGAAATGTTCAACCAAAAAGCCT
GTTGCCGTGCTGTGTATTGGTTGTCTGGTGATTATTCTGGCTGCGAATATTGTTGGTTTGGGTATGGCTGCGTAA

Upstream 100 bases:

>100_bases
GTGACAAGGCTGCACACTATTTAGACTCCTTCGTCATCAGCGGTTTGTGCGCCCTTCATGTTCTGCGCCTACCCGCACCA
TCACAGCGAAGGATAATAAG

Downstream 100 bases:

>100_bases
TATCTGTTATCGCTACGTACTATCTATTATTGCTAAGTACTATCTATTATTAAAGATGATGATATTGACGGGCAGCGTTG
AAAAACCTGCCCGTTATCTT

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNNAIILGIIWHLVGAASAACFYAPFKQVKKWSWETMWSIGGLVSWLILPWTVSYLLLPDFWQYYGSFSIATLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIIGTLMTPILQGRFDVLLGTPGGRMTLLGVFVALIGVAIVSYAGLLKER
AMGIQAEEFNLKKGLILAVMCGIFSAGMSFAMDAAKPMHEAASALGINSLYVALPSYVIIMGGGAIINLSYCFIRLATLK
NLSVKADFSVAKPLLITNILFSALAGLMWYLQFFFYAWGHAKIPQQYDYMSWMLHMSFYVLCGGIVGLLLKEWKCSTKKP
VAVLCIGCLVIILAANIVGLGMAA

Sequences:

>Translated_344_residues
MNNAIILGIIWHLVGAASAACFYAPFKQVKKWSWETMWSIGGLVSWLILPWTVSYLLLPDFWQYYGSFSIATLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIIGTLMTPILQGRFDVLLGTPGGRMTLLGVFVALIGVAIVSYAGLLKER
AMGIQAEEFNLKKGLILAVMCGIFSAGMSFAMDAAKPMHEAASALGINSLYVALPSYVIIMGGGAIINLSYCFIRLATLK
NLSVKADFSVAKPLLITNILFSALAGLMWYLQFFFYAWGHAKIPQQYDYMSWMLHMSFYVLCGGIVGLLLKEWKCSTKKP
VAVLCIGCLVIILAANIVGLGMAA
>Mature_344_residues
MNNAIILGIIWHLVGAASAACFYAPFKQVKKWSWETMWSIGGLVSWLILPWTVSYLLLPDFWQYYGSFSIATLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIIGTLMTPILQGRFDVLLGTPGGRMTLLGVFVALIGVAIVSYAGLLKER
AMGIQAEEFNLKKGLILAVMCGIFSAGMSFAMDAAKPMHEAASALGINSLYVALPSYVIIMGGGAIINLSYCFIRLATLK
NLSVKADFSVAKPLLITNILFSALAGLMWYLQFFFYAWGHAKIPQQYDYMSWMLHMSFYVLCGGIVGLLLKEWKCSTKKP
VAVLCIGCLVIILAANIVGLGMAA

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system)

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family

Homologues:

Organism=Escherichia coli, GI1790341, Length=343, Percent_Identity=79.8833819241982, Blast_Score=572, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHAT_YERP3 (A7FN78)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001402706.1
- ProteinModelPortal:   A7FN78
- STRING:   A7FN78
- GeneID:   5386498
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_3752
- eggNOG:   COG0697
- HOGENOM:   HBG337242
- OMA:   MGESKLG
- ProtClustDB:   PRK13499
- BioCyc:   YPSE349747:YPSIP31758_3752-MONOMER
- HAMAP:   MF_01532
- InterPro:   IPR004673
- InterPro:   IPR010476
- TIGRFAMs:   TIGR00776

Pfam domain/function: PF06379 RhaT

EC number: NA

Molecular weight: Translated: 37459; Mature: 37459

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ad23fd8)-; HASH(0x1b72634c)-; HASH(0x1b1035e8)-; HASH(0x19fc8640)-; HASH(0x1ac18980)-; HASH(0x1af08934)-; HASH(0x1b52d320)-; HASH(0x1a8fc6a8)-; HASH(0x1b2bb6f8)-; HASH(0x1b4df428)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNAIILGIIWHLVGAASAACFYAPFKQVKKWSWETMWSIGGLVSWLILPWTVSYLLLPD
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWQYYGSFSIATLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIIGTLMTPI
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LQGRFDVLLGTPGGRMTLLGVFVALIGVAIVSYAGLLKERAMGIQAEEFNLKKGLILAVM
HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMDAAKPMHEAASALGINSLYVALPSYVIIMGGGAIINLSYCFIRLATLK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHH
NLSVKADFSVAKPLLITNILFSALAGLMWYLQFFFYAWGHAKIPQQYDYMSWMLHMSFYV
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LCGGIVGLLLKEWKCSTKKPVAVLCIGCLVIILAANIVGLGMAA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MNNAIILGIIWHLVGAASAACFYAPFKQVKKWSWETMWSIGGLVSWLILPWTVSYLLLPD
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWQYYGSFSIATLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIIGTLMTPI
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LQGRFDVLLGTPGGRMTLLGVFVALIGVAIVSYAGLLKERAMGIQAEEFNLKKGLILAVM
HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMDAAKPMHEAASALGINSLYVALPSYVIIMGGGAIINLSYCFIRLATLK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHH
NLSVKADFSVAKPLLITNILFSALAGLMWYLQFFFYAWGHAKIPQQYDYMSWMLHMSFYV
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LCGGIVGLLLKEWKCSTKKPVAVLCIGCLVIILAANIVGLGMAA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA