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The map label for this gene is yjeK [H]

Identifier: 170026033

GI number: 170026033

Start: 4208859

End: 4209863

Strand: Direct

Name: yjeK [H]

Synonym: YPK_3819

Alternate gene names: 170026033

Gene position: 4208859-4209863 (Clockwise)

Preceding gene: 170026030

Following gene: 170026034

Centisome position: 89.75

GC content: 47.46

Gene sequence:

>1005_bases
ATGCCAATTAGAGAAGATTGGTTGCAACAACTCGCCGATGTAATTACCGATCCGGACGAATTGCTACGTATTTTGTTCTT
AAATGAACACCCTCACCTGCAACAAGGCTCTGGTGCTCGTCGTTTATTCCCCCTACGCGTACCCCGCGCTTTTGTTGCCC
GTATGCAACCTGGGAATGCATCAGACCCTTTATTACTTCAGGTGCTGACCGCACGTGAAGAGTTTATTACCGCTCCCGGT
TTTACCCACGATCCACTTGATGAACAGCGCAGCGTCGTTCCTGGCCTGTTACATAAATACCGTAACCGCGCGCTATTGTT
GGTCAAAGGTGGCTGTGCAGTCAATTGCCGCTATTGCTTCCGCCGCCATTTCCCTTATCAGGACAATCAAGGCAATAAAG
CTAATTGGCTACAAGCACTGGATTATATTCGTCAACACCCTGAACTGGACGAGATCATTTTTTCAGGGGGTGATCCGTTA
ATGGCAAAAGATCACGAACTCAGTTGGTTACTGGATCAATTGGAGGATATAAAACATATCCGGCGGTTACGTATCCATAC
CCGATTACCGGTGGTGATCCCTGCCCGTATTACTGCAACCCTGTGTCAACGGTTGGGAAGCTCACGGTTACAGGTATTAA
TGGTGACACATATCAACCATGCCAACGAAATAGACCCGCCCCTGCGAGACAGTATGGCACGGTTGAAGCAGGCTGGTGTG
ACGCTATTAAACCAGAGTGTATTACTGCGTGGGGTGAATAATGATGCGGATGTACTGGCAACATTAAGCAATGCCTTATT
TGATGCCGGAATTTTGCCTTATTACATTCATGTATTGGATAAAGTACAGGGCGCAGCCCACTTTATGGTCGATGATGATG
AAGCCCGGCAATTGATGAAAGGTTTACTAAGCCGTGTATCTGGTTACCTGGTACCGCGTCTCACAAGAGAAGTGGGTGGA
GAGCCAAGTAAGACACCATTGGATTTGAGACTGACGCAAAATTAA

Upstream 100 bases:

>100_bases
TTAAGACCGGGACGAAAATCGTTGCTATAATAACTGGCCATGATGGTCCTCAAGAAACTGGTAGTAAGCCTAAAAAATGG
CAAGCATTGTAACCCGAAAC

Downstream 100 bases:

>100_bases
TCACTGCCCAAGCAAGACCCACAAGGACTCATCTCAACGACTCTCTATTCGATAAAACTCAGGAGAGGTTATTGACAACG
CTATTTTTAGCCTCGTGAAT

Product: lysine 2,3-aminomutase YodO family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MPIREDWLQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREEFITAPG
FTHDPLDEQRSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQGNKANWLQALDYIRQHPELDEIIFSGGDPL
MAKDHELSWLLDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGV
TLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLVPRLTREVGG
EPSKTPLDLRLTQN

Sequences:

>Translated_334_residues
MPIREDWLQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREEFITAPG
FTHDPLDEQRSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQGNKANWLQALDYIRQHPELDEIIFSGGDPL
MAKDHELSWLLDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGV
TLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLVPRLTREVGG
EPSKTPLDLRLTQN
>Mature_333_residues
PIREDWLQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREEFITAPGF
THDPLDEQRSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQGNKANWLQALDYIRQHPELDEIIFSGGDPLM
AKDHELSWLLDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVT
LLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLVPRLTREVGGE
PSKTPLDLRLTQN

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=332, Percent_Identity=71.3855421686747, Blast_Score=505, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37897; Mature: 37766

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIREDWLQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNA
CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCC
SDPLLLQVLTAREEFITAPGFTHDPLDEQRSVVPGLLHKYRNRALLLVKGGCAVNCRYCF
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEHHHHH
RRHFPYQDNQGNKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHI
HHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
RRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGV
HHHHHHCCCCEEECHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
TLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMK
HHHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GLLSRVSGYLVPRLTREVGGEPSKTPLDLRLTQN
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
>Mature Secondary Structure 
PIREDWLQQLADVITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNA
CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCC
SDPLLLQVLTAREEFITAPGFTHDPLDEQRSVVPGLLHKYRNRALLLVKGGCAVNCRYCF
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEHHHHH
RRHFPYQDNQGNKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHI
HHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
RRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGV
HHHHHHCCCCEEECHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
TLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMK
HHHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GLLSRVSGYLVPRLTREVGGEPSKTPLDLRLTQN
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]