Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170025782

Identifier: 170025782

GI number: 170025782

Start: 3929654

End: 3930397

Strand: Direct

Name: 170025782

Synonym: YPK_3567

Alternate gene names: NA

Gene position: 3929654-3930397 (Clockwise)

Preceding gene: 170025762

Following gene: 170025783

Centisome position: 83.8

GC content: 36.69

Gene sequence:

>744_bases
ATGAGAAAGAAGCTATATAATGACTTCGCGTGGGAATGCCTGAGGCGAAATCCACAATATATTAGCGATTGGGAATTATT
TATGAAAAATACTCTTACTAATGGAGGGGGTATACCCGATGATTCTGAATTAATCCAATCAGAGCTGGATTTGAATGCAG
AAAAAAAATGGGGAGTAATGAAATATATTGATCCTTATAACTCTGACCCAACAAATGTTTTTTGGTCACTAAAATTAAGT
AACCGTTCAGTTAGAGTTAAACTCAGTAATACTGGAAATGTCAAAGGGGGATATACATGGGGAGATATGTCCAACCTACC
AGGAGTCAAACATCAACGCCTTCTTATGCATGACAATACACTGTGCGTAAAAATATTTAGTCAGAATGGGTATTTTCAGC
TTTTTATCGAGAGTGCAGATGCATTAAAAGATGATTCAAACCTCTATATTTATATCCCTTTGAACCTTGAATCTGATGTT
TTTGCTAAAAATATTGAGTTATTACAGAGCATTGTTAATCACAAAATAGAGGTGGAATGCAAAGAGGAGCAATATTTAGG
TCTCTTGAAGACCATAGATGACAGAAAACAAGGCTTCTCCCACCGGGATATCGCTTCAGAAATTTTTGGTAAGGAACTGG
TAAAAAATGAATGGTCTGCTGACAGTTGGGTCAGAGCAAAAATCCGCTATCGTATAAAGAAGGCGAATGCACTTATTAAT
TACGGCTACCTGAACTTCCTCTAG

Upstream 100 bases:

>100_bases
AACTTATTCGCAGATTTTTTCACCCTTCATACATTTATTAAATTTACATAACCATTAGCACGATGACGTGGATGAATAGC
CAAAATAAGAGGACATAGAT

Downstream 100 bases:

>100_bases
TGTCCTATCTGACATGCAAAGGATCTAAAATCTCTGGAGATTAAGAGGTATTATCACTGGATATAATTAATTATTTCAAT
AGTATAATCTTCCAATGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVMKYIDPYNSDPTNVFWSLKLS
NRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNTLCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDV
FAKNIELLQSIVNHKIEVECKEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN
YGYLNFL

Sequences:

>Translated_247_residues
MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVMKYIDPYNSDPTNVFWSLKLS
NRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNTLCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDV
FAKNIELLQSIVNHKIEVECKEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN
YGYLNFL
>Mature_247_residues
MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVMKYIDPYNSDPTNVFWSLKLS
NRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNTLCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDV
FAKNIELLQSIVNHKIEVECKEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN
YGYLNFL

Specific function: Unknown

COG id: COG5419

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28767; Mature: 28767

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVM
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
KYIDPYNSDPTNVFWSLKLSNRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNT
EECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEECCE
LCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDVFAKNIELLQSIVNHKIEVEC
EEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEE
KEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCEEEE
YGYLNFL
CCEEECC
>Mature Secondary Structure
MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVM
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
KYIDPYNSDPTNVFWSLKLSNRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNT
EECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEECCE
LCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDVFAKNIELLQSIVNHKIEVEC
EEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEE
KEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCEEEE
YGYLNFL
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA