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The map label for this gene is panD [H]

Identifier: 170025689

GI number: 170025689

Start: 3816477

End: 3816857

Strand: Direct

Name: panD [H]

Synonym: YPK_3474

Alternate gene names: 170025689

Gene position: 3816477-3816857 (Clockwise)

Preceding gene: 170025688

Following gene: 170025693

Centisome position: 81.38

GC content: 48.29

Gene sequence:

>381_bases
ATGATACGCACTATGTTGCAAGGCAAACTGCACCGGGTCAAAGTCACTCAAGCGGATTTGCACTATGAAGGCTCCTGCGC
CATCGATCAGGATTTTCTGGAAGCCGCCGGTATTCTGGAATACGAAGCTATTGATATTTATAACGTTGATAACGGTCAGC
GTTTTTCAACCTATGCGATTGCTGCTGAGCGTGGTTCGCGGATTATCTCCGTGAATGGTGCCGCAGCACGCTGCGCTTGT
GTCGGTGATAAGCTCATTATCTGTTCTTATGTACAGATGTCAGATGCTGCTGCCCGTTTGCACCACCCTAAAGTGGCTTA
TTTTGAAGGTGAAAATCAGCTACAACGCAAAGCTAAGGCAGTGCCGGTTCAGGTCGCTTAA

Upstream 100 bases:

>100_bases
GCGAAATCTATCTGGGTCTATTTTTATGATTGAGCCGCTCCCTGAATCAGTAGATTATAGGGTCTGGTAAGAGATTTAAT
CAGGGTCAAAGGTAAGAGTT

Downstream 100 bases:

>100_bases
TCCCCCTCAGTACCTGAAGCTACGGGGGTTAGCGATGTTCGCTCCCCCGGATCACTGGCTAGATAGCCATAATAATGCGA
TTAACCTCGGGCGCTTAAAT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLEAAGILEYEAIDIYNVDNGQRFSTYAIAAERGSRIISVNGAAARCAC
VGDKLIICSYVQMSDAAARLHHPKVAYFEGENQLQRKAKAVPVQVA

Sequences:

>Translated_126_residues
MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLEAAGILEYEAIDIYNVDNGQRFSTYAIAAERGSRIISVNGAAARCAC
VGDKLIICSYVQMSDAAARLHHPKVAYFEGENQLQRKAKAVPVQVA
>Mature_126_residues
MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLEAAGILEYEAIDIYNVDNGQRFSTYAIAAERGSRIISVNGAAARCAC
VGDKLIICSYVQMSDAAARLHHPKVAYFEGENQLQRKAKAVPVQVA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=126, Percent_Identity=79.3650793650794, Blast_Score=209, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 13858; Mature: 13858

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLEAAGILEYEAIDIYNVDNGQRFSTYAI
CCCCCCCCCEEEEEEEECCCEECCCCCCCHHHHHHCCCEEEEEEEEEECCCCCEEEEEEE
AAERGSRIISVNGAAARCACVGDKLIICSYVQMSDAAARLHHPKVAYFEGENQLQRKAKA
EECCCCEEEEECCCCEEEEECCCCEEEEEEEECCCHHHHHCCCEEEEEECCHHHHHHHHC
VPVQVA
CCEEEC
>Mature Secondary Structure
MIRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLEAAGILEYEAIDIYNVDNGQRFSTYAI
CCCCCCCCCEEEEEEEECCCEECCCCCCCHHHHHHCCCEEEEEEEEEECCCCCEEEEEEE
AAERGSRIISVNGAAARCACVGDKLIICSYVQMSDAAARLHHPKVAYFEGENQLQRKAKA
EECCCCEEEEECCCCEEEEECCCCEEEEEEEECCCHHHHHCCCEEEEEECCHHHHHHHHC
VPVQVA
CCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA