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The map label for this gene is ygaD [C]

Identifier: 170025591

GI number: 170025591

Start: 3703944

End: 3704432

Strand: Reverse

Name: ygaD [C]

Synonym: YPK_3376

Alternate gene names: 170025591

Gene position: 3704432-3703944 (Counterclockwise)

Preceding gene: 170025594

Following gene: 170025590

Centisome position: 79.0

GC content: 49.08

Gene sequence:

>489_bases
ATGAGCGAAGGACAACTACGTCAACTCAGTATTGCGGTTGGGCATAAGTTAAAAGAACACGGTGCGTGGGTGACCTGTGC
AGAATCTTGTACTGGGGGGTGGGTAGCCAAAGCCCTGACGGATATTGCTGGCAGTTCTGCTTATTTTGACCGCGGTTTTG
TCACCTACAGCAATGCGGCAAAGCAAGATCTATTGGGCGTATCTGAAACGACCTTAGCGCGTTATGGTGCGGTGAGTGAG
GCCGTGGTACGTGAAATGGCATTGGGGGCATTGAAACAAGCCAATGCAGACTTTGCCGTTTCCATTAGTGGTATTGCGGG
GCCTGATGGTGGTAGCGCAGATAAACCGGTAGGCACTGTCTGGTTTGGTTTTATCTCACGCGAAGGGCCGATTAGTGCAA
GAAAAAAACACTTTTCTGGTGATCGTGACTCAGTACGGTTGCAAGCAGCTGTTTTCGCACTACAAACACTATTCGATGAT
TTTCTGTAA

Upstream 100 bases:

>100_bases
ATGCTGCGAGACGTTTCGCATAACTGAGTGTGGTTGCTATCGCAGGCTAAAGAAGTGCTACTATCGGCAGCAAGAAATTT
ATTTAGAATGGGGGGCAACA

Downstream 100 bases:

>100_bases
AAATAGGCTTGATACTGTATGATTGTACAGTATAATTAGCGGTAATTTCTTGTACAAAATAACATTCAGTGGCGATGGTA
GGGGGAACCCTGGCATACCA

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSEGQLRQLSIAVGHKLKEHGAWVTCAESCTGGWVAKALTDIAGSSAYFDRGFVTYSNAAKQDLLGVSETTLARYGAVSE
AVVREMALGALKQANADFAVSISGIAGPDGGSADKPVGTVWFGFISREGPISARKKHFSGDRDSVRLQAAVFALQTLFDD
FL

Sequences:

>Translated_162_residues
MSEGQLRQLSIAVGHKLKEHGAWVTCAESCTGGWVAKALTDIAGSSAYFDRGFVTYSNAAKQDLLGVSETTLARYGAVSE
AVVREMALGALKQANADFAVSISGIAGPDGGSADKPVGTVWFGFISREGPISARKKHFSGDRDSVRLQAAVFALQTLFDD
FL
>Mature_161_residues
SEGQLRQLSIAVGHKLKEHGAWVTCAESCTGGWVAKALTDIAGSSAYFDRGFVTYSNAAKQDLLGVSETTLARYGAVSEA
VVREMALGALKQANADFAVSISGIAGPDGGSADKPVGTVWFGFISREGPISARKKHFSGDRDSVRLQAAVFALQTLFDDF
L

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=162, Percent_Identity=66.6666666666667, Blast_Score=215, Evalue=9e-58,
Organism=Escherichia coli, GI1787818, Length=147, Percent_Identity=40.1360544217687, Blast_Score=107, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 17104; Mature: 16973

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGQLRQLSIAVGHKLKEHGAWVTCAESCTGGWVAKALTDIAGSSAYFDRGFVTYSNAA
CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHH
KQDLLGVSETTLARYGAVSEAVVREMALGALKQANADFAVSISGIAGPDGGSADKPVGTV
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHH
WFGFISREGPISARKKHFSGDRDSVRLQAAVFALQTLFDDFL
HEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEGQLRQLSIAVGHKLKEHGAWVTCAESCTGGWVAKALTDIAGSSAYFDRGFVTYSNAA
CCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHH
KQDLLGVSETTLARYGAVSEAVVREMALGALKQANADFAVSISGIAGPDGGSADKPVGTV
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHH
WFGFISREGPISARKKHFSGDRDSVRLQAAVFALQTLFDDFL
HEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA